Positions of Hox-neighboring genes in deuterostomes [Dataset]

Comparing SPU (a), POC (b), PFL (c), and BFL (d) protein query to protein databases of other deuterostomes using blastp around HOX gene clusters. Each panel is a screenshot from S6 Data. The results are sorted by chromosome number followed by the position of the query IDs.

Detalhes bibliográficos
Autores: Lin, Che-Yi, Marlétaz, Ferdinand, Pérez-Posada, Alberto, Martínez-García, Pedro Manuel, Schloissnig, Siegfried, Peluso, Paul, Conception, Greg T., Bump, Paul, Chen, Yi-Chih, Chou, Cindy, Lin, Ching-Yi, Fan, Tzu-Pei, Tsai, Chang-Tai, Gómez-Skarmeta, José Luis, Tena, Juan J., Lowe, Christopher J., Rank, David R., Rokhsar, Daniel S., Yu, Jr-Kai, Su, Yi-Hsien
Formato: conjunto de datos
Estado:Versión publicada
Fecha de publicación:2024
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/369928
Acesso em linha:http://hdl.handle.net/10261/369928
Access Level:acceso abierto
Palavra-chave:Transposable elements within
Relatively short transition
Mixing event produced
Level genome assemblies
Assembled microsyntenic blocks
Also provide evidence
Schizocardium californicum </
Ptychodera flava </
Various developmental processes
Orthologous genes distributed
Deuterostome common ancestor
Deuterostome body plans
Specific chromosomal modifications
Exhibit remarkable chromosome
div >< p
2 Hemichordate species
Highly rearranged chromosomes
Deuterostome alg complement
Developmental genes
Specific alg
Rearranged chromosomes
Hemichordate chromosomes
2 chromosomes
n </
Chromosomal architecture
Homologous alg
Deuterostome lineages
Deuterostome algs
Subsequently split
Sea urchins
Scale macrosynteny
Regulatory controls
Monophyletic group
Lower densities
Likely due
Includes hemichordata
Genetic changes
Generate chromosome
Extant hemichordates
Events may
Established via
Different lineages
Delineate lineage
Another chromosome
Ancestral condition
algs ).
3 pre
Descrição
Resumo:Comparing SPU (a), POC (b), PFL (c), and BFL (d) protein query to protein databases of other deuterostomes using blastp around HOX gene clusters. Each panel is a screenshot from S6 Data. The results are sorted by chromosome number followed by the position of the query IDs.

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