Supplementary Materials of Annex I. High throughput stationary 13C-based Metabolic Flux Analysis of Pichia pastoris strains. PhD Thesis Albert Fina Romero

Supplementary materials to the protocol describing High Throughput Stationary 13C-Metabolic Flux Analysis in Pichia pastoris. This protocol is published in Annex 1 of Albert Fina's PhD thesis. The attached contain relevant information and scripts which are used for: Compression of a Genome Scal...

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Detalhes bibliográficos
Autores: Fina Romero, Albert|||0000-0001-7949-0484, Ferrer, Pau|||0000-0002-5287-4127, Albiol i Sala, Joan|||0000-0001-5626-429X
Formato: conjunto de datos
Fecha de publicación:2022
País:España
Recursos:Universitat Autònoma de Barcelona
Repositorio:Dipòsit Digital de Documents de la UAB
Idioma:inglés
OAI Identifier:oai:ddd.uab.cat:263045
Acesso em linha:https://ddd.uab.cat/record/263045
https://dx.doi.org/urn:doi:10.5565/ddd.uab.cat/263045
Access Level:acceso abierto
Palavra-chave:Fluxomics
13C-Metabolic Flux Analysis
13C-MFA
Pichia pastoris
High Throughput
Descrição
Resumo:Supplementary materials to the protocol describing High Throughput Stationary 13C-Metabolic Flux Analysis in Pichia pastoris. This protocol is published in Annex 1 of Albert Fina's PhD thesis. The attached contain relevant information and scripts which are used for: Compression of a Genome Scale Metabolic Model of Pichia pastoris into a core model using Matlab. Translation of the core model into a FTBL format core model, which is the input model for the python-based software influx_si. Modification of the core FTBL model to generate an input model for IsoDesign (a software for the optimization of the C-source for 13C-Metabolic Flux Analysis).