Synthetic biology for microbiome-based genetic domestication of the skin and the sea

Microorganisms exhibit remarkable adaptability and represent a vast genetic resource. Synthetic biology aims to leverage this diversity for sustainability and medicine. However, many microbes remain unexplored due to limited genetic tools. This research developed genetic engineering tools for Dinoro...

Descripción completa

Detalles Bibliográficos
Autor: Nevot Sánchez, Guillermo
Tipo de recurso: tesis doctoral
Estado:Versión publicada
Fecha de publicación:2024
País:España
Institución:CBUC, CESCA
Repositorio:TDR. Tesis Doctorales en Red
OAI Identifier:oai:www.tdx.cat:10803/692372
Acceso en línea:http://hdl.handle.net/10803/692372
Access Level:acceso embargado
Palabra clave:Cutibacterium acnes
Dinoroseobacter shibae
Microbiome engineering
Synthetic biology
Skin
Biología sintética
Terapias bacterianas
Microbioma
Piel
Ingeniería genética
575
Descripción
Sumario:Microorganisms exhibit remarkable adaptability and represent a vast genetic resource. Synthetic biology aims to leverage this diversity for sustainability and medicine. However, many microbes remain unexplored due to limited genetic tools. This research developed genetic engineering tools for Dinoroseobacter shibae and Cutibacterium acnes, abundant in the ocean and on the skin, respectively. For C. acnes, we investigated phage defenses and developed a genetic toolkit including expression tools, CRISPRi, biosensors, recombinases, and auxotrophic genes, facilitating its use in skin engineering. We created auxotrophic strains and an antioxidant strain reducing oxidative stress in UV-treated keratinocytes. For D. shibae, we engineered fimbrils to enhance biofilm adhesion and designed biosensors for temperature and oxygen, demonstrating its potential for marine applications. Additionally, we found that using preprints and inquiry-based lessons in teaching synthetic biology improved students' technical and soft skills, proving effective for interdisciplinary education