Next-Generation Sequencing for Confronting Virus Pandemics

Virus pandemics have happened, are happening and will happen again. In recent decades, the rate of zoonotic viral spillover into humans has accelerated, mirroring the expansion of our global footprint and travel network, including the expansion of viral vectors and the destruction of natural spaces,...

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Detalles Bibliográficos
Autores: Quer, Josep|||0000-0003-0014-084X, Colomer-Castell, Sergi|||0000-0002-0307-7455, Campos, Carolina|||0000-0002-0132-7027, Andrés, Cristina|||0000-0002-3200-0895, Piñana, Maria|||0000-0002-4766-2613, Cortese, Maria Francesca|||0000-0002-4318-532X, González Sánchez, Alejandra|||0000-0002-1809-3415, Garcia-Cehic, D.|||0000-0002-0009-038X, Ibáñez, Marta|||0000-0001-5185-7467, Pumarola Suñé, Tomàs|||0000-0002-5171-7461, Rodríguez Frías, Francisco|||0000-0002-9128-7013, Antón Pagarolas, Andrés, 1976-|||0000-0002-1476-0815, Tabernero, David|||0000-0002-1146-4084
Tipo de recurso: artículo
Fecha de publicación:2022
País:España
Institución:Universitat Autònoma de Barcelona
Repositorio:Dipòsit Digital de Documents de la UAB
Idioma:inglés
OAI Identifier:oai:ddd.uab.cat:258173
Acceso en línea:https://ddd.uab.cat/record/258173
https://dx.doi.org/urn:doi:10.3390/v14030600
Access Level:acceso abierto
Palabra clave:NGS
Deep-sequencing
Viruses
SARS-CoV-2
COVID-19
Variability
Zoonosis
Pandemics
Diagnostic tools
Descripción
Sumario:Virus pandemics have happened, are happening and will happen again. In recent decades, the rate of zoonotic viral spillover into humans has accelerated, mirroring the expansion of our global footprint and travel network, including the expansion of viral vectors and the destruction of natural spaces, bringing humans closer to wild animals. Once viral cross-species transmission to humans occurs, transmission cannot be stopped by cement walls but by developing barriers based on knowledge that can prevent or reduce the effects of any pandemic. Controlling a local transmission affecting few individuals is more efficient that confronting a community outbreak in which infections cannot be traced. Genetic detection, identification, and characterization of infectious agents using next-generation sequencing (NGS) has been proven to be a powerful tool allowing for the development of fast PCR-based molecular assays, the rapid development of vaccines based on mRNA and DNA, the identification of outbreaks, transmission dynamics and spill-over events, the detection of new variants and treatment of vaccine resistance mutations, the development of direct-acting antiviral drugs, the discovery of relevant minority variants to improve knowledge of the viral life cycle, strengths and weaknesses, the potential for becoming dominant to take appropriate preventive measures, and the discovery of new routes of viral transmission.