Supplementary information: Neuronal type-specific modulation of cognition and AP-1 signaling by early-life rearing conditions

Supplementary Figures S1-S9. -- Supplementary Files: o Supplementary Data 1 related to Figure 2. ifferentially expressed genes in the comparison of CA1 and DG nuRNA-seq samples (see attached Excel file, 1 sheet). o Supplementary Data 2 related to Figure 2. gProfiler GO analysis of DEGs upregulated i...

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Detalles Bibliográficos
Autores: Alaiz-Noya, Marta, Miozzo, Federico, Fuentes-Ramos, Miguel, Machnicka, Magdalena A., Kurowska, Marcelina, Herrera, Macarena, Blanco, Beatriz del, Niñerola, Sergio, Bustos-Martínez, Isabel, Wilczynski, Bartek, Barco, Ángel
Tipo de recurso: conjunto de datos
Fecha de publicación:2025
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/412176
Acceso en línea:http://hdl.handle.net/10261/412176
Access Level:acceso abierto
Descripción
Sumario:Supplementary Figures S1-S9. -- Supplementary Files: o Supplementary Data 1 related to Figure 2. ifferentially expressed genes in the comparison of CA1 and DG nuRNA-seq samples (see attached Excel file, 1 sheet). o Supplementary Data 2 related to Figure 2. gProfiler GO analysis of DEGs upregulated in CA1 SC (A) and DG SC (B) (see attached Excel file, 2 sheets). o Supplementary Data 3 related to Figure 2. Differentially accessible regions in the comparison of CA1 and DG ATAC-seq samples and associated genes (see attached Excel file, 2 sheets). o Supplementary Data 4 relative to Figure 2. Differentially acetylated regions in the comparison of CA1 and DG H3K27ac CUT&TAG samples and associated genes (see attached Excel file, 2 sheets). o Supplementary Data 5 related to Figure 2. Differentially methylated regions in the comparison of CA1 and DG WGBS samples and associated genes (see attached Excel file, 2 sheets). o Supplementary Data 6 related to Figure 4. Differentially expressed genes in the comparison of EE/SC/IE nuRNA-seq samples (see attached Excel file, 2 sheets). o Supplementary Data 7 relative to Figure 5. Differentially accessible regions in the comparison of EE/SC/IE DG ATAC-seq samples and associated genes (see attached Excel file, 2 sheets). o Supplementary Data 8 relative to Figure 5. Differentially methylated regions in the comparison of EE/SC/IE WGBS samples and associated genes (see attached Excel file, 9 sheets). o Supplementary Data 9 related to Figure 6. Relationship between DEGs and chromatin changes (see attached Excel file, 2 sheets). o Supplementary Data 10 related to Figure 7. GO analysis of AP1 related genes (see attached Excel file, 3 sheets). o Supplementary Data 11 related to Methods. Sequencing depth and read alignment (see attached Excel file, 1 sheet).