SeqBreed: a python tool to evaluate genomic prediction in complex scenarios

[Background]: Genomic prediction (GP) is a method whereby DNA polymorphism information is used to predict breeding values for complex traits. Although GP can significantly enhance predictive accuracy, it can be expensive and difficult to implement. To help design optimum breeding programs and experi...

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Detalhes bibliográficos
Autores: Pérez-Enciso, Miguel, Ramírez‑Ayala, Lino C., Zingaretti, Laura M.
Formato: artículo
Estado:Versión publicada
Fecha de publicación:2020
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/229247
Acesso em linha:http://hdl.handle.net/10261/229247
Access Level:acceso abierto
Descrição
Resumo:[Background]: Genomic prediction (GP) is a method whereby DNA polymorphism information is used to predict breeding values for complex traits. Although GP can significantly enhance predictive accuracy, it can be expensive and difficult to implement. To help design optimum breeding programs and experiments, including genome-wide association studies and genomic selection experiments, we have developed SeqBreed, a generic and flexible forward simulator programmed in python3.