Application of variational autoencoders in image-based analysis of cellular response profiles

Cell images reconstruction from a subset of the MCF7 image repository is the primary goal of this work. It is implemented through a variational autoencoder: a generative, unsupervised learning paradigm whose architecture consists of an encoder that reduces the dimensionality of the input space by ob...

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Detalles Bibliográficos
Autor: Muñoz Alloza, Jesús
Tipo de recurso: tesis de maestría
Fecha de publicación:2020
País:España
Institución:Universitat Oberta de Catalunya (UOC)
Repositorio:O2, repositorio institucional de la UOC
OAI Identifier:oai:openaccess.uoc.edu:10609/121466
Acceso en línea:http://hdl.handle.net/10609/121466
Access Level:acceso abierto
Palabra clave:variational autoencoders
deep learning
generative modelling
autoencoders variacionals
aprenentatge profund
modelatge generatiu
codificadores automáticos variacionales
aprendizaje profundo
modelado generativo
Bioinformatics -- TFM
Bioinformàtica -- TFM
Bioinformática -- TFM
Descripción
Sumario:Cell images reconstruction from a subset of the MCF7 image repository is the primary goal of this work. It is implemented through a variational autoencoder: a generative, unsupervised learning paradigm whose architecture consists of an encoder that reduces the dimensionality of the input space by obtaining a distribution over the latent space and a decoder, that rebuilds the inputs from the encoding. This work is completed with the description of the activities associated with the primary goal, like image segmentation and processing and infrastructure setup, the latest driven by automation tools and performed in a cloud environment.