Electron holes in G-Quadruplexes: The role of adenine ending groups

The study deals with four-stranded DNA structures (G-Quadruplexes), known to undergo ionization upon direct absorption of low-energy UV photons. Combining quantum chemistry calculations and time-resolved absorption spectroscopy with 266 nm excitation, it focuses on the electron holes generated in te...

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Detalles Bibliográficos
Autores: Balanikas, Evangelos, Martínez Fernández, Lara, Baldacchino, Gérard, Markovitsi, Dimitra
Tipo de recurso: artículo
Fecha de publicación:2021
País:España
Institución:Universidad Autónoma de Madrid
Repositorio:Biblos-e Archivo. Repositorio Institucional de la UAM
Idioma:inglés
OAI Identifier:oai:repositorio.uam.es:10486/704468
Acceso en línea:http://hdl.handle.net/10486/704468
https://dx.doi.org/10.3390/ijms222413436
Access Level:acceso abierto
Palabra clave:Adenine
Cation
Deoxyguanosine Phosphate
Guanine
Guanine Quadruplex
Absorption Spectroscopy
Anisotropy
Deprotonation
DNA Structure
Electron
Oxidative Stress
Química
Descripción
Sumario:The study deals with four-stranded DNA structures (G-Quadruplexes), known to undergo ionization upon direct absorption of low-energy UV photons. Combining quantum chemistry calculations and time-resolved absorption spectroscopy with 266 nm excitation, it focuses on the electron holes generated in tetramolecular systems with adenine groups at the ends. Our computations show that the electron hole is placed in a single guanine site, whose location depends on the position of the adenines at the 3′ or 5′ ends. This position also affects significantly the electronic absorption spectrum of (G+ )• radical cations. Their decay is highly anisotropic, composed of a fast process (<2 µs), followed by a slower one occurring in ~20 µs. On the one hand, they undergo deprotonation to (G-H2)• radicals and, on the other, they give rise to a reaction product absorbing in the 300–500 nm spectral domain