Integrating target capture with whole genome sequencing of recent and natural history collections to explain the phylogeography of wild-growing and cultivated cannabis

The raw Hyb-Seq data are available on NCBI Sequence Read Archive (SRA) under BioProject PRJNA1162815. The additional publicly available sequences used in the study are listed in Table S1. The intermediate files (trimmed alignments, gene and species trees, filtered VCF file and structure outputs) and...

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Detalles Bibliográficos
Autores: Balant, Manica, Vitales, Daniel, Wang, Zhiqiang, Barina, Zoltán, Fu, Lin, Gao, Tiangang, Garnatje, Teresa, Gras, Airy, Hayat, Muhammad Qasim, Oganesian, Marine, Pellicer, Jaume, Salami, Seyed A., Seregin, Alexey P., Stepanyan-Gandilyan, Nina, Sultana, Nusrat, Tsooj, Shagdar, Urgamal, Magsar, Vallès, Joan, van Velzen, Robin, Pokorny, Lisa
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2025
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/395253
Acceso en línea:http://hdl.handle.net/10261/395253
https://api.elsevier.com/content/abstract/scopus_id/105007109520
Access Level:acceso abierto
Palabra clave:Angiosperms353
Cannabaceae
Hemp
Herbariomics
Hyb-Seq
Phylogenomics
Population genomics
Single nucleotide polymorphisms
Descripción
Sumario:The raw Hyb-Seq data are available on NCBI Sequence Read Archive (SRA) under BioProject PRJNA1162815. The additional publicly available sequences used in the study are listed in Table S1. The intermediate files (trimmed alignments, gene and species trees, filtered VCF file and structure outputs) and workflow are available from Zenodo (10.5281/zenodo.14567235).

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