Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways

Understanding the plasticity of genomes has been greatly aided by assays for recombination, repair and mutagenesis. These assays have been developed in microbial systems that provide the advantages of genetic and molecular reporters that can readily be manipulated. Cellular assays comprise genetic,...

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Detalhes bibliográficos
Autores: Klein, Hannah L., Bačinskaja, Giedré, Che, Jun, Cheblal, Anais, Elango, Rajula, Epshtein, Anastasiya, Fitzgerald, Devon M., Gómez González, Belén, Khan, Sharik R., Kumar, Sandeep Mothish, Leland, Bryan A., Marie, Léa, Aguilera López, Andrés
Formato: artículo
Estado:Versión publicada
Fecha de publicación:2019
País:España
Recursos:Universidad de Sevilla (US)
Repositorio:idUS. Depósito de Investigación de la Universidad de Sevilla
OAI Identifier:oai:idus.us.es:11441/86449
Acesso em linha:https://hdl.handle.net/11441/86449
https://doi.org/10.15698/mic2019.01.664
Access Level:acceso abierto
Palavra-chave:Chromatin dynamics
Chromosome rearrangements
Crossovers
DNA breaks
DNA repair centers
DNA resection
DSBs
Fluorescent proteins
Gene amplification
Gene conversion
Genome instability
Gross chromosome rearrangements
Holliday junctions
Homologous recombination
Mitotic recombination
Mutagenesis
Pulsed field gel electrophoresis
R-loops
Replication fork stalling
Single-particle tracking
Sister chromatid recombination
Sister repetitive sequences
Site-specific chromosome breaks
Toxic recombination intermediates
Yeast artificial chromosome
Descrição
Resumo:Understanding the plasticity of genomes has been greatly aided by assays for recombination, repair and mutagenesis. These assays have been developed in microbial systems that provide the advantages of genetic and molecular reporters that can readily be manipulated. Cellular assays comprise genetic, molecular, and cytological reporters. The assays are powerful tools but each comes with its particular advantages and limitations. Here the most commonly used assays are reviewed, discussed, and presented as the guidelines for future studies.