Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia
Hypoxia-inducible factors (HIFs) are a family of evolutionary conserved alpha-beta heterodimeric transcription factors that induce a wide range of genes in response to low oxygen tension. Molecular mechanisms that mediate oxygen-dependent HIF regulation operate at the level of the alpha subunit, con...
| Autores: | , , , , , , , |
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| Tipo de recurso: | artículo |
| Estado: | Versión publicada |
| Fecha de publicación: | 2010 |
| País: | Argentina |
| Institución: | Universidad Nacional de Buenos Aires. Facultad de Ciencias Exactas y Naturales |
| Repositorio: | Biblioteca Digital (UBA-FCEN) |
| Idioma: | inglés |
| OAI Identifier: | paperaa:paper_15537390_v6_n6_p1_Dekanty |
| Acceso en línea: | http://hdl.handle.net/20.500.12110/paper_15537390_v6_n6_p1_Dekanty |
| Access Level: | acceso abierto |
| Palabra clave: | argonaute 1 protein hypoxia inducible factor microRNA argonaute1 protein, Drosophila basic helix loop helix transcription factor Drosophila protein initiation factor animal cell article controlled study Drosophila melanogaster gene identification genetic screening genomics hypoxia nonhuman RNA interference transcription regulation animal anoxia cell line genetic association genetic transcription genetics metabolism Animals Anoxia Basic Helix-Loop-Helix Transcription Factors Cell Line Drosophila Proteins Eukaryotic Initiation Factors Genome-Wide Association Study RNA Interference Transcription, Genetic |
| Sumario: | Hypoxia-inducible factors (HIFs) are a family of evolutionary conserved alpha-beta heterodimeric transcription factors that induce a wide range of genes in response to low oxygen tension. Molecular mechanisms that mediate oxygen-dependent HIF regulation operate at the level of the alpha subunit, controlling protein stability, subcellular localization, and transcriptional coactivator recruitment. We have conducted an unbiased genome-wide RNA interference (RNAi) screen in Drosophila cells aimed to the identification of genes required for HIF activity. After 3 rounds of selection, 30 genes emerged as critical HIF regulators in hypoxia, most of which had not been previously associated with HIF biology. The list of genes includes components of chromatin remodeling complexes, transcription elongation factors, and translational regulators. One remarkable hit was the argonaute 1 (ago1) gene, a central element of the microRNA (miRNA) translational silencing machinery. Further studies confirmed the physiological role of the miRNA machinery in HIF-dependent transcription. This study reveals the occurrence of novel mechanisms of HIF regulation, which might contribute to developing novel strategies for therapeutic intervention of HIF-related pathologies, including heart attack, cancer, and stroke. © 2010 Dekanty et al. |
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