Complete mitochondrial genome of the California halibut, Paralichthys californicus
The California halibut, Paralichthys californicus, is a highly priced flatfish because of its size and meat quality. This work presents the complete mitochondrial genome of P. californicus. Total DNA from muscle tissue was extracted and sequenced using the Illumina platform. Reads were cleaned, trim...
| Autores: | , , , , |
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| Tipo de documento: | artigo |
| Estado: | Versão publicada |
| Data de publicação: | 2020 |
| País: | México |
| Recursos: | Universidad Autónoma de Baja California Sur |
| Repositório: | Repositorio Institucional de la UABCS |
| Idioma: | inglês |
| OAI Identifier: | oai:repositorioinstitucional.uabc.mx:20.500.12930/7589 |
| Acesso em linha: | https://www.cienciasmarinas.com.mx/index.php/cmarinas/article/view/3121 |
| Access Level: | Acceso aberto |
| Palavra-chave: | mitogenoma secuenciación de siguiente generación (NGS) secuenciación masiva lenguado de California Paralichthys californicus mitogenome next-generation sequencing (NGS) mass sequencing California halibut |
| Resumo: | The California halibut, Paralichthys californicus, is a highly priced flatfish because of its size and meat quality. This work presents the complete mitochondrial genome of P. californicus. Total DNA from muscle tissue was extracted and sequenced using the Illumina platform. Reads were cleaned, trimmed, assembled de novo, and annotated. The California halibut mitogenome is 16,858 bp in length (GenBank accession number: MT859134), containing 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and the control region. P. californicus mitogenome was most similar to Paralichthys olivaceus than to other flatfish mitogenomes, in agreement with their geographic distribution. This information deepens the knowledge of the California halibut, which is not only ecologically important, but also a socioeconomically relevant resource for fishery and aquaculture in California, USA, and Baja California, Mexico. |
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