Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)

Iberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out t...

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Autores: Figueiredo Cardoso, Tainã, Luigi- Sierra, María Gracia, Castelló, Anna, Cabrera, Betlem, Noce, Antonia, Mármol-Sánchez, Emilio, García-González, Ricardo, Fernández-Arias, Alberto, Alabart, José Luis, López-Olvera, Jorge Ramón, Mentaberre García, Gregorio, Granados-Torres, José Enrique, Cardells-Peris, Jesús, Molina, Antonio, Sànchez, Armand, Clop, Alex, Amills, Marcel
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2021
País:España
Institución:Universitat de Lleida (UdL)
Repositorio:Repositori Obert UdL
OAI Identifier:oai:repositori.udl.cat:10459.1/72944
Acceso en línea:https://doi.org/10.1111/eva.13299
http://hdl.handle.net/10459.1/72944
Access Level:acceso abierto
Palabra clave:Capra pyrenaica
Capra Ibex
High-density SNP arrays
Cabra salvatge pirinenca
Ungulats
Biodiversitat--Conservació
Gens
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dc.title.none.fl_str_mv Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
spellingShingle Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
Figueiredo Cardoso, Tainã
Capra pyrenaica
Capra Ibex
High-density SNP arrays
Cabra salvatge pirinenca
Ungulats
Biodiversitat--Conservació
Gens
title_short Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_full Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_fullStr Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_full_unstemmed Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_sort Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
dc.creator.none.fl_str_mv Figueiredo Cardoso, Tainã
Luigi- Sierra, María Gracia
Castelló, Anna
Cabrera, Betlem
Noce, Antonia
Mármol-Sánchez, Emilio
García-González, Ricardo
Fernández-Arias, Alberto
Alabart, José Luis
López-Olvera, Jorge Ramón
Mentaberre García, Gregorio
Granados-Torres, José Enrique
Cardells-Peris, Jesús
Molina, Antonio
Sànchez, Armand
Clop, Alex
Amills, Marcel
author Figueiredo Cardoso, Tainã
author_facet Figueiredo Cardoso, Tainã
Luigi- Sierra, María Gracia
Castelló, Anna
Cabrera, Betlem
Noce, Antonia
Mármol-Sánchez, Emilio
García-González, Ricardo
Fernández-Arias, Alberto
Alabart, José Luis
López-Olvera, Jorge Ramón
Mentaberre García, Gregorio
Granados-Torres, José Enrique
Cardells-Peris, Jesús
Molina, Antonio
Sànchez, Armand
Clop, Alex
Amills, Marcel
author_role author
author2 Luigi- Sierra, María Gracia
Castelló, Anna
Cabrera, Betlem
Noce, Antonia
Mármol-Sánchez, Emilio
García-González, Ricardo
Fernández-Arias, Alberto
Alabart, José Luis
López-Olvera, Jorge Ramón
Mentaberre García, Gregorio
Granados-Torres, José Enrique
Cardells-Peris, Jesús
Molina, Antonio
Sànchez, Armand
Clop, Alex
Amills, Marcel
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv Capra pyrenaica
Capra Ibex
High-density SNP arrays
Cabra salvatge pirinenca
Ungulats
Biodiversitat--Conservació
Gens
topic Capra pyrenaica
Capra Ibex
High-density SNP arrays
Cabra salvatge pirinenca
Ungulats
Biodiversitat--Conservació
Gens
description Iberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out to restock Iberian wild goat populations (very often with hunting purposes), but they were not systematically planned or recorded. On the other hand, recent data suggest the occurrence of hybridization events between Iberian wild goats and domestic goats (Capra hircus). Augmentation translocations and interspecific hybridization might have contributed to increase the diversity of Iberian wild goats. With the aim of investigating this issue, we have genotyped 118 Iberian wild goats from Tortosa-Beceite, Sierra Nevada, Muela de Cortes, Gredos, Batuecas, and Ordesa and Monte Perdido by using the Goat SNP50 BeadChip (Illumina). The analysis of genotypic data indicated that Iberian wild goat populations are strongly differentiated and display low diversity. Only three Iberian wild goats out from 118 show genomic signatures of mixed ancestry, a result consistent with a scenario in which past augmentation translocations have had a limited impact on the diversity of Iberian wild goats. Besides, we have detected eight Iberian wild goats from Tortosa-Beceite with signs of domestic goat introgression. Although rare, hybridization with domestic goats could become a potential threat to the genetic integrity of Iberian wild goats; hence, measures should be taken to avoid the presence of uncontrolled herds of domestic or feral goats in mountainous areas inhabited by this iconic wild ungulate.
publishDate 2021
dc.date.none.fl_str_mv 2021
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://doi.org/10.1111/eva.13299
http://hdl.handle.net/10459.1/72944
url https://doi.org/10.1111/eva.13299
http://hdl.handle.net/10459.1/72944
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv info:eu-repo/grantAgreement/MINECO//AGL2016-76108‐R
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-105805RB-I00
Reproducció del document publicat a https://doi.org/10.1111/eva.13299
Evolutionary Applications, 2021, vol.14, p.2618–2634
dc.rights.none.fl_str_mv cc-by (c) Figueiredo et al., 2021
info:eu-repo/semantics/openAccess
http://creativecommons.org/licenses/by/4.0/
rights_invalid_str_mv cc-by (c) Figueiredo et al., 2021
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv John Wiley and Sons
publisher.none.fl_str_mv John Wiley and Sons
dc.source.none.fl_str_mv reponame:Repositori Obert UdL
instname:Universitat de Lleida (UdL)
instname_str Universitat de Lleida (UdL)
reponame_str Repositori Obert UdL
collection Repositori Obert UdL
repository.name.fl_str_mv
repository.mail.fl_str_mv
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spelling Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)Figueiredo Cardoso, TainãLuigi- Sierra, María GraciaCastelló, AnnaCabrera, BetlemNoce, AntoniaMármol-Sánchez, EmilioGarcía-González, RicardoFernández-Arias, AlbertoAlabart, José LuisLópez-Olvera, Jorge RamónMentaberre García, GregorioGranados-Torres, José EnriqueCardells-Peris, JesúsMolina, AntonioSànchez, ArmandClop, AlexAmills, MarcelCapra pyrenaicaCapra IbexHigh-density SNP arraysCabra salvatge pirinencaUngulatsBiodiversitat--ConservacióGensIberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out to restock Iberian wild goat populations (very often with hunting purposes), but they were not systematically planned or recorded. On the other hand, recent data suggest the occurrence of hybridization events between Iberian wild goats and domestic goats (Capra hircus). Augmentation translocations and interspecific hybridization might have contributed to increase the diversity of Iberian wild goats. With the aim of investigating this issue, we have genotyped 118 Iberian wild goats from Tortosa-Beceite, Sierra Nevada, Muela de Cortes, Gredos, Batuecas, and Ordesa and Monte Perdido by using the Goat SNP50 BeadChip (Illumina). The analysis of genotypic data indicated that Iberian wild goat populations are strongly differentiated and display low diversity. Only three Iberian wild goats out from 118 show genomic signatures of mixed ancestry, a result consistent with a scenario in which past augmentation translocations have had a limited impact on the diversity of Iberian wild goats. Besides, we have detected eight Iberian wild goats from Tortosa-Beceite with signs of domestic goat introgression. Although rare, hybridization with domestic goats could become a potential threat to the genetic integrity of Iberian wild goats; hence, measures should be taken to avoid the presence of uncontrolled herds of domestic or feral goats in mountainous areas inhabited by this iconic wild ungulate.This research was funded by the European Regional Development Fund (FEDER)/Ministerio de Ciencia e Innovaci?n?Agencia Estatal de Investigaci?n/Project Reference grant: PID2019-105805RB-I00 and by the CERCA Programme/Generalitat de Catalunya. We acknowledge the support of the Spanish Ministry of Economy and Competitiveness for the Center of Excellence Severo Ochoa 2020?2023 (CEX2019-000902-S) grant awarded to the Centre for Research in Agricultural Genomics (CRAG). We also acknowledge Jos? Folch, of the Centro de Investigaci?n y Tecnolog?a Agroalimentaria de Arag?n for his help in the development of his research. MGLS was funded with a FPI Ph.D. grant from the Spanish Ministry of Education (BES-C-2017-079079). TFC was funded with a fellowship from the CAPES Foundation-Coordination of Improvement of Higher Education, Ministry of Education of the Federal Government of Brazil. EMS was funded with a FPU Ph.D. grant from the Spanish Ministry of Education (FPU15/01733). GM is a Serra H?nter fellow (professor) of the Generalitat de Catalunya. Thanks also to the CERCA Programme of the Generalitat de Catalunya for their support. Sample collection benefitted from the research grants CGL2012-40043-C02-01, CGL2012-40043-C02-02, and CGL2016-80543-P, also from the Spanish Ministry of Economy and Competitiveness. Many thanks to Laura Botigu? for her help and assistance in carrying out the f3 tests of admixture.John Wiley and Sons2021info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionhttps://doi.org/10.1111/eva.13299http://hdl.handle.net/10459.1/72944reponame:Repositori Obert UdL instname:Universitat de Lleida (UdL)Inglésinfo:eu-repo/grantAgreement/MINECO//AGL2016-76108‐Rinfo:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-105805RB-I00Reproducció del document publicat a https://doi.org/10.1111/eva.13299Evolutionary Applications, 2021, vol.14, p.2618–2634cc-by (c) Figueiredo et al., 2021info:eu-repo/semantics/openAccesshttp://creativecommons.org/licenses/by/4.0/oai:repositori.udl.cat:10459.1/729442026-06-24T12:42:17Z
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