Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks

13 Pág.

Detalhes bibliográficos
Autores: Safaa, Hosam, Khaled, Rawan, Isaac, Suzy, Mostafa, Rofida, Ragab, Mohamed, Elsayed, Dalia, Helal, Mostafa
Formato: artículo
Estado:Versión publicada
Fecha de publicación:2023
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/348468
Acesso em linha:http://hdl.handle.net/10261/348468
https://api.elsevier.com/content/abstract/scopus_id/85174489509
Access Level:acceso abierto
Palavra-chave:In silico
Mallard duck
Microsatellite
Muscovy duck
SSR
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spelling Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducksSafaa, HosamKhaled, RawanIsaac, SuzyMostafa, RofidaRagab, MohamedElsayed, DaliaHelal, MostafaIn silicoMallard duckMicrosatelliteMuscovy duckSSR13 Pág.Microsatellites are important markers for livestock including ducks. The development of microsatellites is expensive and labor-intensive. Meanwhile, the in silico approach for mining for microsatellites became a practicable alternative. Therefore, the current study aimed at comparing whole-genome and chromosome-wise microsatellite mining approaches in Muscovy and Mallard ducks and testing the transferability of markers between them. The GMATA software was used for the in silico study, and validation was performed using 26 primers.The authors are thankful to the Deanship of Scientific Research at University of Bisha for supporting this work through the Fast-Track Research Support Program.Peer reviewedSpringerUniversity of BishaSafaa, Hosam [0000-0002-9192-6313]Khaled, Rawan [0009-0006-7032-6585]Isaac, Suzy [0009-0000-2752-4849]Helal, Mostafa [0000-0002-8005-9023]Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202420242023info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/10261/348468https://api.elsevier.com/content/abstract/scopus_id/85174489509reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)InglésDepartamento de ​Mejora Genética Animalhttps://doi.org/10.1186/s43141-023-00556-zSíinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3484682026-05-22T06:33:51Z
dc.title.none.fl_str_mv Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
title Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
spellingShingle Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
Safaa, Hosam
In silico
Mallard duck
Microsatellite
Muscovy duck
SSR
title_short Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
title_full Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
title_fullStr Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
title_full_unstemmed Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
title_sort Genome-wide in silico characterization, validation, and cross-species transferability of microsatellite markers in Mallard and Muscovy ducks
dc.creator.none.fl_str_mv Safaa, Hosam
Khaled, Rawan
Isaac, Suzy
Mostafa, Rofida
Ragab, Mohamed
Elsayed, Dalia
Helal, Mostafa
author Safaa, Hosam
author_facet Safaa, Hosam
Khaled, Rawan
Isaac, Suzy
Mostafa, Rofida
Ragab, Mohamed
Elsayed, Dalia
Helal, Mostafa
author_role author
author2 Khaled, Rawan
Isaac, Suzy
Mostafa, Rofida
Ragab, Mohamed
Elsayed, Dalia
Helal, Mostafa
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv University of Bisha
Safaa, Hosam [0000-0002-9192-6313]
Khaled, Rawan [0009-0006-7032-6585]
Isaac, Suzy [0009-0000-2752-4849]
Helal, Mostafa [0000-0002-8005-9023]
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv In silico
Mallard duck
Microsatellite
Muscovy duck
SSR
topic In silico
Mallard duck
Microsatellite
Muscovy duck
SSR
description 13 Pág.
publishDate 2023
dc.date.none.fl_str_mv 2023
2024
2024
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/348468
https://api.elsevier.com/content/abstract/scopus_id/85174489509
url http://hdl.handle.net/10261/348468
https://api.elsevier.com/content/abstract/scopus_id/85174489509
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv Departamento de ​Mejora Genética Animal
https://doi.org/10.1186/s43141-023-00556-z
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Springer
publisher.none.fl_str_mv Springer
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 15,812429

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