Genetic Evidence Reveals Distinct Lineage of Chinese Pangolin in Nepal: Insights From Scat and Blood Samples for Conservation and Wildlife Forensics

Pangolins face critical threats from illegal trade and habitat loss, making their conservation a global priority. Despite their ecological and conservation significance, these elusive creatures remain poorly understood, particularly regarding their phylogeography and genetic diversity. This study su...

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Detalles Bibliográficos
Autores: Hogan, Fiona, Wedrowicz, Faye, Khatiwada, Ambika Prasad, Joshi, Janardan Dev, Wasser, Sam, Wright, Wendy
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2025
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/391786
Acceso en línea:http://hdl.handle.net/10261/391786
https://api.elsevier.com/content/abstract/scopus_id/85218974938
Access Level:acceso abierto
Palabra clave:Mitochondrial DNA
Non‐invasive genetic sampling
Pangolin
Scat
Descripción
Sumario:Pangolins face critical threats from illegal trade and habitat loss, making their conservation a global priority. Despite their ecological and conservation significance, these elusive creatures remain poorly understood, particularly regarding their phylogeography and genetic diversity. This study successfully isolated DNA from two types of pangolin scat samples (whole scat and swabs) and blood that had been stored frozen for up to 3 years. A mitochondrial cytochrome b (424 bp) sequence was reliably generated from both types of scat samples, irrespective of whether the scat appeared in 'good' or 'poor' condition at the time of collection, and from the blood samples. Sanger sequencing identified four novel cytochrome b haplotypes, with distinct variations observed across sampling regions in Nepal (central and east). A comparison with reference sequences from China, Taiwan and Thailand revealed that the Chinese pangolins in Nepal represent a genetically distinct variant, differing by 15-19 base pairs from these other populations. These findings underscore significant genetic differentiation of Chinese pangolins in Nepal, with implications for the species' conservation and management. The methods described in this study are robust and adaptable, offering a valuable framework for broader genetic studies of pangolin populations across Nepal. Such approaches could facilitate the genetic mapping of pangolin variations, aiding in the identification of significant populations, the evaluation of conservation interventions and forensic applications to combat illegal poaching. This work emphasises the critical role of genetics in understanding and protecting pangolins, offering insights that are vital for their long-term conservation.