Standards recommendations for the Earth BioGenome Project

A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer...

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Autores: Lawniczak, Mara K. N., Durbin, Richard|||0000-0002-9130-1006, Flicek, Paul|||0000-0002-3897-7955, Lindblad-Toh, Kerstin|||0000-0001-8338-0253, Wei, Xiaofeng, Archibald, John M.|||0000-0001-7255-780X, Baker, William|||0000-0001-6727-1831, Belov, Katherine, Blaxter, Mark|||0000-0003-2861-949X, Marquès i Bonet, Tomàs|||0000-0002-5597-3075, Childers, Anna K.|||0000-0002-0747-8539, Coddington, Jonathan A.|||0000-0001-6004-7730, Crandall, Keith A.|||0000-0002-0836-3389, Crawford, Andrew J., Davey, Robert P., Di Palma, Federica, Fang, Qi|||0000-0002-9181-8689, Haerty, Wilfried, Hall, Neil|||0000-0003-2808-0009, Hoff, Katharina|||0000-0002-7333-8390, Howe, Kerstin|||0000-0003-2237-513X, Jarvis, Erich|||0000-0001-8931-5049, Johnson, Warren E.|||0000-0002-5954-186X, Johnson, Rebecca, Kersey, Paul J.|||0000-0002-7054-800X, Liu, Xin, Lopez, Jose V.|||0000-0002-1637-4125, Myers, Eugene W.|||0000-0002-6580-7839, Vinnere Pettersson, Olga|||0000-0002-5597-1870, Phillippy, Adam M.|||0000-0003-2983-8934, Poelchau, Monica|||0000-0002-4584-6056, Pruitt, Kim D., Rhie, Arang|||0000-0002-9809-8127, Castilla-Rubio, Juan Carlos, Sahu, Sunil Kumar|||0000-0002-4742-9870, Salmon, Nicholas A., Soltis, Pamela|||0000-0001-9310-8659, Swarbreck, David|||0000-0002-5453-1013, Thibaud-Nissen, Françoise|||0000-0003-4957-7807, Wang, Sibo, Wegrzyn, Jill|||0000-0001-5923-0888, Zhang, Guojie|||0000-0001-6860-1521, Zhang, He, Lewin, Harris A.|||0000-0002-1043-7287, Richards, Stephen|||0000-0001-8959-5466
Tipo de recurso: artículo
Fecha de publicación:2022
País:España
Institución:Universitat Autònoma de Barcelona
Repositorio:Dipòsit Digital de Documents de la UAB
Idioma:inglés
OAI Identifier:oai:ddd.uab.cat:251393
Acceso en línea:https://ddd.uab.cat/record/251393
https://dx.doi.org/urn:doi:10.1073/pnas.2115639118
Access Level:acceso abierto
Palabra clave:Earth BioGenome Project
Genomics
Ethics
Genome assembly
Descripción
Sumario:A global international initiative, such as the Earth BioGenome Project (EBP), requires both agreement and coordination on standards to ensure that the collective effort generates rapid progress toward its goals. To this end, the EBP initiated five technical standards committees comprising volunteer members from the global genomics scientific community: Sample Collection and Processing, Sequencing and Assembly, Annotation, Analysis, and IT and Informatics. The current versions of the resulting standards documents are available on the EBP website, with the recognition that opportunities, technologies, and challenges may improve or change in the future, requiring flexibility for the EBP to meet its goals. Here, we describe some highlights from the proposed standards, and areas where additional challenges will need to be met.

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