The molecular chaperone ALYREF promotes R-loop resolution and maintains genome stability

Unscheduled R-loops usually cause DNA damage and replication stress, and are therefore a major threat to genome stability. Several RNA processing factors, including the conserved THO complex and its associated RNA and DNA-RNA helicase UAP56, prevent R-loop accumulation in cells. Here, we investigate...

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Detalles Bibliográficos
Autores: Bhandari, Jay, Guillén-Mendoza, Cristina, Banks, Kathryn, Eliaz, Lillian, Southwell, Sierra, Eyaa, Darriel, Luna, Rosa, Aguilera, Andrés, Xue, Xiaoyu
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2024
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/378587
Acceso en línea:http://hdl.handle.net/10261/378587
https://api.elsevier.com/content/abstract/scopus_id/85211055351
Access Level:acceso abierto
Palabra clave:ALYREF
DNA-RNA helicase
R-loop
TREX complex
UAP56
Genome instability
Descripción
Sumario:Unscheduled R-loops usually cause DNA damage and replication stress, and are therefore a major threat to genome stability. Several RNA processing factors, including the conserved THO complex and its associated RNA and DNA-RNA helicase UAP56, prevent R-loop accumulation in cells. Here, we investigate the function of ALYREF, an RNA export adapter associated with UAP56 and the THO complex, in R-loop regulation. We demonstrate that purified ALYREF promotes UAP56-mediated R-loop dissociation in vitro, and this stimulation is dependent on its interaction with UAP56 and R-loops. Importantly, we show that ALYREF binds DNA-RNA hybrids and R-loops. Consistently, ALYREF depletion causes R-loop accumulation and R-loop-mediated genome instability in cells. We propose that ALYREF, apart from its known role in RNA metabolism and export, is a key cellular R-loop coregulator, which binds R-loops and stimulates UAP56-driven resolution of unscheduled R-loops during transcription.