Table_5_Evolutionary Dynamics of the Repeatome Explains Contrasting Differences in Genome Sizes and Hybrid and Polyploid Origins of Grass Loliinae Lineages.DOCX
Phylogenetic signal based on Blomberg’s K values of repeat cluster contents obtained from the comparative RE2 analysis of Loliinae samples assessed in each of the four Loliinae groups: (A) Loliinae (38 samples, 38 clusters), (B) Broad-leaved (BL) Loliinae (15 samples, 96 clusters), (C) fine-leaved (...
| Autores: | , , , , |
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| Tipo de recurso: | conjunto de datos |
| Fecha de publicación: | 2022 |
| País: | España |
| Institución: | Consejo Superior de Investigaciones Científicas (CSIC) |
| Repositorio: | DIGITAL.CSIC. Repositorio Institucional del CSIC |
| OAI Identifier: | oai:digital.csic.es:10261/331437 |
| Acceso en línea: | http://hdl.handle.net/10261/331437 |
| Access Level: | acceso abierto |
| Palabra clave: | Diploidized paleo-allopolyploids Genome size diversification Festuca Lolium Phylogenetic signal Repeatome Transposable elements 5S loci |
| Sumario: | Phylogenetic signal based on Blomberg’s K values of repeat cluster contents obtained from the comparative RE2 analysis of Loliinae samples assessed in each of the four Loliinae groups: (A) Loliinae (38 samples, 38 clusters), (B) Broad-leaved (BL) Loliinae (15 samples, 96 clusters), (C) fine-leaved (FL) Loliinae (17 samples, 122 clusters), (D) Schedonorus (16 samples, 167 clusters), using the phylosig option of the phytools R package. Cluster abundance values (number of PE reads) are indicated in Supplementary Table 4. K values close to one indicate phylogenetic signal, values close to zero phylogenetic independence, and values >1 more phylogenetic signal than expected. p-Values based on 1000 randomizations. Significant values are highlighted in bold. |
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