Supplementary Tables Thesis AMGM Chapter IV [Dataset]

The document, in Excel format, contains: Table S4.1. Pairwise genetic distances between closely related samples. Table S4.2. List of non-redundant annotated mutations between closely related complete genomes Table S4.3. Assessment of variant calling in positions masked by the short-read mapping appr...

Descripción completa

Detalles Bibliográficos
Autor: García-Marín, Ana María
Tipo de recurso: conjunto de datos
Fecha de publicación:2025
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/401288
Acceso en línea:http://hdl.handle.net/10261/401288
Access Level:acceso abierto
Palabra clave:Mycobacterium tuberculosis
Complete genomes
Long-read sequecing
Genomic epidemiology
Within-host diversity
Transmission
http://metadata.un.org/sdg/3
Ensure healthy lives and promote well-being for all at all ages
Infectious diseases
Genome
Descripción
Sumario:The document, in Excel format, contains: Table S4.1. Pairwise genetic distances between closely related samples. Table S4.2. List of non-redundant annotated mutations between closely related complete genomes Table S4.3. Assessment of variant calling in positions masked by the short-read mapping approach. Table S4.4. Genetic distances between isolates from the same transmission network. Table S4.5. Cluster- and patient-specific reference genomes and related samples. Table S4.6. Mapping quality control using common and closer reference genomes.