The evolution of relapse of adult T cell acute lymphoblastic leukemia

Background: Adult T cell acute lymphoblastic leukemia (T-ALL) is a rare disease that affects less than 10 individuals in one million. It has been less studied than its cognate pediatric malignancy, which is more prevalent. A higher percentage of the adult patients relapse, compared to children. It i...

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Autores: Sentís, Inés, González, Santi, Genescà, Eulalia, García Hernández, Violeta, Muiños, Ferran, González, Celia, López Arribillaga, Erika, 1986-, González, Jessica, Fernández-Ibarrondo, Lierni, Mularoni, Loris, Espinosa-Anke, Luis, Bellosillo Paricio, Beatriz, Ribera, Josep Maria, Bigas Salvans, Anna, Gonzalez-Perez, Abel, López Bigas, Núria
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2020
País:España
Institución:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Repositorio:Recercat. Dipósit de la Recerca de Catalunya
OAI Identifier:oai:recercat.cat:10230/46281
Acceso en línea:http://hdl.handle.net/10230/46281
http://dx.doi.org/10.1186/s13059-020-02192-z
Access Level:acceso abierto
Palabra clave:ALL relapse
Adult acute lymphoblastic leukemia
Evolution of leukemia relapse
T-ALL
T-ALL evolution under therapy
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network_name_str España
repository_id_str
dc.title.none.fl_str_mv The evolution of relapse of adult T cell acute lymphoblastic leukemia
title The evolution of relapse of adult T cell acute lymphoblastic leukemia
spellingShingle The evolution of relapse of adult T cell acute lymphoblastic leukemia
Sentís, Inés
ALL relapse
Adult acute lymphoblastic leukemia
Evolution of leukemia relapse
T-ALL
T-ALL evolution under therapy
title_short The evolution of relapse of adult T cell acute lymphoblastic leukemia
title_full The evolution of relapse of adult T cell acute lymphoblastic leukemia
title_fullStr The evolution of relapse of adult T cell acute lymphoblastic leukemia
title_full_unstemmed The evolution of relapse of adult T cell acute lymphoblastic leukemia
title_sort The evolution of relapse of adult T cell acute lymphoblastic leukemia
dc.creator.none.fl_str_mv Sentís, Inés
González, Santi
Genescà, Eulalia
García Hernández, Violeta
Muiños, Ferran
González, Celia
López Arribillaga, Erika, 1986-
González, Jessica
Fernández-Ibarrondo, Lierni
Mularoni, Loris
Espinosa-Anke, Luis
Bellosillo Paricio, Beatriz
Ribera, Josep Maria
Bigas Salvans, Anna
Gonzalez-Perez, Abel
López Bigas, Núria
author Sentís, Inés
author_facet Sentís, Inés
González, Santi
Genescà, Eulalia
García Hernández, Violeta
Muiños, Ferran
González, Celia
López Arribillaga, Erika, 1986-
González, Jessica
Fernández-Ibarrondo, Lierni
Mularoni, Loris
Espinosa-Anke, Luis
Bellosillo Paricio, Beatriz
Ribera, Josep Maria
Bigas Salvans, Anna
Gonzalez-Perez, Abel
López Bigas, Núria
author_role author
author2 González, Santi
Genescà, Eulalia
García Hernández, Violeta
Muiños, Ferran
González, Celia
López Arribillaga, Erika, 1986-
González, Jessica
Fernández-Ibarrondo, Lierni
Mularoni, Loris
Espinosa-Anke, Luis
Bellosillo Paricio, Beatriz
Ribera, Josep Maria
Bigas Salvans, Anna
Gonzalez-Perez, Abel
López Bigas, Núria
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.subject.none.fl_str_mv ALL relapse
Adult acute lymphoblastic leukemia
Evolution of leukemia relapse
T-ALL
T-ALL evolution under therapy
topic ALL relapse
Adult acute lymphoblastic leukemia
Evolution of leukemia relapse
T-ALL
T-ALL evolution under therapy
description Background: Adult T cell acute lymphoblastic leukemia (T-ALL) is a rare disease that affects less than 10 individuals in one million. It has been less studied than its cognate pediatric malignancy, which is more prevalent. A higher percentage of the adult patients relapse, compared to children. It is thus essential to study the mechanisms of relapse of adult T-ALL cases. Results: We profile whole-genome somatic mutations of 19 primary T-ALLs from adult patients and the corresponding relapse malignancies and analyze their evolution upon treatment in comparison with 238 pediatric and young adult ALL cases. We compare the mutational processes and driver mutations active in primary and relapse adult T-ALLs with those of pediatric patients. A precise estimation of clock-like mutations in leukemic cells shows that the emergence of the relapse clone occurs several months before the diagnosis of the primary T-ALL. Specifically, through the doubling time of the leukemic population, we find that in at least 14 out of the 19 patients, the population of relapse leukemia present at the moment of diagnosis comprises more than one but fewer than 108 blasts. Using simulations, we show that in all patients the relapse appears to be driven by genetic mutations. Conclusions: The early appearance of a population of leukemic cells with genetic mechanisms of resistance across adult T-ALL cases constitutes a challenge for treatment. Improving early detection of the malignancy is thus key to prevent its relapse.
publishDate 2020
dc.date.none.fl_str_mv 2020
2021
2021
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10230/46281
http://dx.doi.org/10.1186/s13059-020-02192-z
url http://hdl.handle.net/10230/46281
http://dx.doi.org/10.1186/s13059-020-02192-z
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv Genome Biol. 2020; 21(1):284
info:eu-repo/grantAgreement/EC/H2020/682398
info:eu-repo/grantAgreement/EC/H2020/754510
info:eu-repo/grantAgreement/ES/1PE/SAF2015-66084-R
dc.rights.none.fl_str_mv http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv BioMed Central
publisher.none.fl_str_mv BioMed Central
dc.source.none.fl_str_mv reponame:Recercat. Dipósit de la Recerca de Catalunya
instname:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
instname_str Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
reponame_str Recercat. Dipósit de la Recerca de Catalunya
collection Recercat. Dipósit de la Recerca de Catalunya
repository.name.fl_str_mv
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spelling The evolution of relapse of adult T cell acute lymphoblastic leukemiaSentís, InésGonzález, SantiGenescà, EulaliaGarcía Hernández, VioletaMuiños, FerranGonzález, CeliaLópez Arribillaga, Erika, 1986-González, JessicaFernández-Ibarrondo, LierniMularoni, LorisEspinosa-Anke, LuisBellosillo Paricio, BeatrizRibera, Josep MariaBigas Salvans, AnnaGonzalez-Perez, AbelLópez Bigas, NúriaALL relapseAdult acute lymphoblastic leukemiaEvolution of leukemia relapseT-ALLT-ALL evolution under therapyBackground: Adult T cell acute lymphoblastic leukemia (T-ALL) is a rare disease that affects less than 10 individuals in one million. It has been less studied than its cognate pediatric malignancy, which is more prevalent. A higher percentage of the adult patients relapse, compared to children. It is thus essential to study the mechanisms of relapse of adult T-ALL cases. Results: We profile whole-genome somatic mutations of 19 primary T-ALLs from adult patients and the corresponding relapse malignancies and analyze their evolution upon treatment in comparison with 238 pediatric and young adult ALL cases. We compare the mutational processes and driver mutations active in primary and relapse adult T-ALLs with those of pediatric patients. A precise estimation of clock-like mutations in leukemic cells shows that the emergence of the relapse clone occurs several months before the diagnosis of the primary T-ALL. Specifically, through the doubling time of the leukemic population, we find that in at least 14 out of the 19 patients, the population of relapse leukemia present at the moment of diagnosis comprises more than one but fewer than 108 blasts. Using simulations, we show that in all patients the relapse appears to be driven by genetic mutations. Conclusions: The early appearance of a population of leukemic cells with genetic mechanisms of resistance across adult T-ALL cases constitutes a challenge for treatment. Improving early detection of the malignancy is thus key to prevent its relapse.The authors would like to thank the Asociación Española Contra el Cáncer (AECC) for financially supporting this project (GC16173697BIGA). N.L.-B. acknowledges funding from the European Research Council (consolidator grant 682398) and the ERDF/Spanish Ministry of Science, Innovation and Universities–Spanish State Research Agency/DamReMap Project (RTI2018-094095-B-I00). S. G work is supported by the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie grant agreement No. 754510. I. S is supported by FPI fellowship from Spanish Ministry of Economy and Competitiveness (project reference SAF2015-66084-R). V.G-H. is supported by the AECC (project reference GC16173697BIGA-9). IRB Barcelona is a recipient of a Severo Ochoa Centre of Excellence Award from the Spanish Ministry of Economy and Competitiveness (MINECO; Government of Spain) and is supported by CERCA (Generalitat de Catalunya).BioMed Central202120212020info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/pdfhttp://hdl.handle.net/10230/46281http://dx.doi.org/10.1186/s13059-020-02192-zreponame:Recercat. Dipósit de la Recerca de Catalunyainstname:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)InglésGenome Biol. 2020; 21(1):284info:eu-repo/grantAgreement/EC/H2020/682398info:eu-repo/grantAgreement/EC/H2020/754510info:eu-repo/grantAgreement/ES/1PE/SAF2015-66084-R© The Author(s). 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data mahttp://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessoai:recercat.cat:10230/462812026-05-29T05:05:01Z
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