Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence

2016_06_27 MalesSpecMorph_museum Colorimetric Spectra and Morphological variable measures per museum skin, males. SNP calls output from the GBS Bioinformatics pipeline SNP calls in HapMap format with basic filtering on missingness and allele frequency for 95 Junco samples, generated by the Cornell U...

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Detalles Bibliográficos
Autores: Friis, Guillermo, Aleixandre, Pau, Rodríguez-Estrella, Ricardo, Navarro-Sigüenza, Adolfo G., Milá, Borja
Tipo de recurso: conjunto de datos
Fecha de publicación:2016
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/282158
Acceso en línea:http://hdl.handle.net/10261/282158
http://datadryad.org/stash/dataset/doi:10.5061/dryad.30374
Access Level:acceso abierto
Palabra clave:Genotyping-by-sequencing
Avian radiation
Middle and upper Pleistocene
Junco vulcani
Junco hyemalis
Junco phaeonotus
Junco insularis
Holocene
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spelling Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidenceFriis, GuillermoAleixandre, PauRodríguez-Estrella, RicardoNavarro-Sigüenza, Adolfo G.Milá, BorjaGenotyping-by-sequencingAvian radiationMiddle and upper PleistoceneJunco vulcaniJunco hyemalisJunco phaeonotusJunco insularisHolocene2016_06_27 MalesSpecMorph_museum Colorimetric Spectra and Morphological variable measures per museum skin, males. SNP calls output from the GBS Bioinformatics pipeline SNP calls in HapMap format with basic filtering on missingness and allele frequency for 95 Junco samples, generated by the Cornell University’s Institute for Genomic Diversity (IGD). c1.snpmerged.filtered.hmpNatural systems composed of closely-related taxa that vary in the degree of phenotypic divergence and geographic isolation, provide an opportunity to investigate the rate of phenotypic diversification and the relative roles of selection and drift in driving lineage formation. The genus Junco (Aves: Emberizidae) of North America includes parapatric northern forms that are markedly divergent in plumage pattern and color, in contrast to geographically isolated southern populations in remote areas that show moderate phenotypic divergence. Here, we quantify patterns of phenotypic divergence in morphology and plumage color, and use mitochondrial DNA genes, a nuclear intron, and genome-wide SNPs to reconstruct the demographic and evolutionary history of the genus to infer relative rates of evolutionary divergence among lineages. We found that geographically isolated populations have evolved independently for hundreds of thousands of years despite little differentiation in phenotype, in sharp contrast to phenotypically diverse northern forms, which have diversified within the last few thousand years as a result of the rapid postglacial recolonization of North America. SNP data resolved young northern lineages into reciprocally monophyletic lineages, indicating low rates of gene flow even among closely related parapatric forms, and suggesting a role for strong genetic drift or multifarious selection acting on multiple loci in driving lineage divergence. Juncos represent a compelling example of speciation-in-action, where the combined effects of historical and selective factors have produced one of the fastest cases of speciation known in vertebrates.Peer reviewedDryadConsejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202220222016info:eu-repo/semantics/datasethttp://purl.org/coar/resource_type/c_ddb1hmp; xlsxhttp://hdl.handle.net/10261/282158http://datadryad.org/stash/dataset/doi:10.5061/dryad.30374reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)InglésFriis, Guillermo; Aleixandre, Pau; Rodríguez-Estrella, Ricardo; Navarro-Sigüenza, Adolfo G.; Milá, Borja (2016): Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence ; https://doi.org/10.1111/mec.13911. http://hdl.handle.net/10261/157693https://doi.org/10.5061/dryad.30374Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/2821582026-05-22T06:33:51Z
dc.title.none.fl_str_mv Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
title Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
spellingShingle Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
Friis, Guillermo
Genotyping-by-sequencing
Avian radiation
Middle and upper Pleistocene
Junco vulcani
Junco hyemalis
Junco phaeonotus
Junco insularis
Holocene
title_short Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
title_full Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
title_fullStr Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
title_full_unstemmed Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
title_sort Data from: Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence
dc.creator.none.fl_str_mv Friis, Guillermo
Aleixandre, Pau
Rodríguez-Estrella, Ricardo
Navarro-Sigüenza, Adolfo G.
Milá, Borja
author Friis, Guillermo
author_facet Friis, Guillermo
Aleixandre, Pau
Rodríguez-Estrella, Ricardo
Navarro-Sigüenza, Adolfo G.
Milá, Borja
author_role author
author2 Aleixandre, Pau
Rodríguez-Estrella, Ricardo
Navarro-Sigüenza, Adolfo G.
Milá, Borja
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Genotyping-by-sequencing
Avian radiation
Middle and upper Pleistocene
Junco vulcani
Junco hyemalis
Junco phaeonotus
Junco insularis
Holocene
topic Genotyping-by-sequencing
Avian radiation
Middle and upper Pleistocene
Junco vulcani
Junco hyemalis
Junco phaeonotus
Junco insularis
Holocene
description 2016_06_27 MalesSpecMorph_museum Colorimetric Spectra and Morphological variable measures per museum skin, males. SNP calls output from the GBS Bioinformatics pipeline SNP calls in HapMap format with basic filtering on missingness and allele frequency for 95 Junco samples, generated by the Cornell University’s Institute for Genomic Diversity (IGD). c1.snpmerged.filtered.hmp
publishDate 2016
dc.date.none.fl_str_mv 2016
2022
2022
dc.type.none.fl_str_mv info:eu-repo/semantics/dataset
http://purl.org/coar/resource_type/c_ddb1
format dataset
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/282158
http://datadryad.org/stash/dataset/doi:10.5061/dryad.30374
url http://hdl.handle.net/10261/282158
http://datadryad.org/stash/dataset/doi:10.5061/dryad.30374
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv Friis, Guillermo; Aleixandre, Pau; Rodríguez-Estrella, Ricardo; Navarro-Sigüenza, Adolfo G.; Milá, Borja (2016): Rapid postglacial diversification and long-term stasis within the songbird genus Junco: phylogeographic and phylogenomic evidence ; https://doi.org/10.1111/mec.13911. http://hdl.handle.net/10261/157693
https://doi.org/10.5061/dryad.30374
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv hmp; xlsx
dc.publisher.none.fl_str_mv Dryad
publisher.none.fl_str_mv Dryad
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 15,81155

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