Regulatory landscape fusion in rhabdomyosarcoma through interactions between the PAX3 promoter and FOXO1 regulatory elements

[Background] : The organisation of vertebrate genomes into topologically associating domains (TADs) is believed to facilitate the regulation of the genes located within them. A remaining question is whether TAD organisation is achieved through the interactions of the regulatory elements within them...

Descripción completa

Detalles Bibliográficos
Autores: Vicente-García, Cristina, Villarejo-Balcells, Bárbara, Irastorza-Azcárate, Ibai, Naranjo, Silvia, Acemel, Rafael D., Tena, Juan J., Rigby, Peter W. J., Devos, Damien P., Gómez-Skarmeta, José Luis, Carvajal, Jaime J.
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2017
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/151582
Acceso en línea:http://hdl.handle.net/10261/151582
Access Level:acceso abierto
Palabra clave:TAD
CTCF
Transcriptional regulation
FOXO1
PAX3
Alveolar rhabdomyosarcoma
4C-seq
Descripción
Sumario:[Background] : The organisation of vertebrate genomes into topologically associating domains (TADs) is believed to facilitate the regulation of the genes located within them. A remaining question is whether TAD organisation is achieved through the interactions of the regulatory elements within them or if these interactions are favoured by the pre-existence of TADs. If the latter is true, the fusion of two independent TADs should result in the rewiring of the transcriptional landscape and the generation of ectopic contacts.