Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration

(1) Background: Maintaining soil fertility and crop productivity using natural microbial diversity could be a feasible approach for achieving sustainable development in agriculture. In this study, we compared soils from vineyards under organic and conventional management by predicting functional pro...

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Autores: Alcalá Herrera, Rafael, Moreno Sánchez, Beatriz, Aguirrebegoa Barreña, Martin, Winter, S., Robles Cruz, Ana Belén, Ramos Font, María Eugenia, Benítez León, Emilio
Tipo de recurso: artículo
Fecha de publicación:2023
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/330490
Acceso en línea:http://hdl.handle.net/10261/330490
Access Level:acceso abierto
Palabra clave:Vineyard
Cover vegetation
Ecosystem functions
Nutrient cycling
Soil bacteria
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spelling Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestrationAlcalá Herrera, RafaelMoreno Sánchez, BeatrizAguirrebegoa Barreña, MartinWinter, S.Robles Cruz, Ana BelénRamos Font, María EugeniaBenítez León, EmilioVineyardCover vegetationEcosystem functionsNutrient cyclingSoil bacteria(1) Background: Maintaining soil fertility and crop productivity using natural microbial diversity could be a feasible approach for achieving sustainable development in agriculture. In this study, we compared soils from vineyards under organic and conventional management by predicting functional profiles through metagenomic analysis based on the 16S rRNA gene. (2) Methods: The structure, diversity and predictive functions of soil bacteria related to the biogeochemical cycle of the soil were analyzed, including oxidative and hydrolytic C-cycling enzymes, N-cycling enzymes and P-cycling enzymes. The inter-row spontaneous vegetation in the organic vineyards was also characterized. (3) Results: A clear effect of the farming system (organic vs. conventional) and cover management (herbicides plus tillage, mowing only and mowing plus tillage) on bacterial beta diversity and predicted functions was evidenced. While conventional viticulture increased the potential capacity of the soil to regulate the cycling of inorganic forms of N, organic viticulture in general enhanced those functions involving organic N, P and C substrates. Although the soil bacterial community responded differently to contrasting soil management strategies, nutrient cycling and carbon sequestration functions remained preserved, suggesting a high bacterial functional redundancy in the soil in any case. However, most of the predicted bacterial functions related to soil organic matter turnover were enhanced by organic management. (4) Conclusions: We posit the potential for organic viticulture to adequately address climate change adaptation in the context of sustainable agriculture.This research was funded by the research project SECBIVIT, which was funded through the 2017–2018 Belmont Forum and BiodivERsA joint call for research proposals, under the BiodivScen ERA-Net COFUND program, with the funding organizations: Agencia Estatal de Investigación (Ministerio de Ciencia e Innovación/ES/Grant #10.13039/501100011033; PCI2018-092938), Austrian Science Fund (AT/Grant #I 4025-B32), Federal Ministry of Education and Research and Projektträger VDI/VDE Innovation + Technik GmbH (DE), French National Research Agency (FR), Netherlands Organisation for Scientific Research (NL), National Science Foundation (US/Grant #1850943) and Romanian Executive Agency for Higher Education, Research, Development and Innovation Funding (RO).Multidisciplinary Digital Publishing InstituteMinisterio de Ciencia e Innovación (España)European CommissionNetherlands Organization for Scientific ResearchNational Science Foundation (US)Executive Unit for Financing Higher Education, Research, Development and Innovation (Romania)Belmont ForumBiodivERsAConsejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]2023202320232023info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501http://hdl.handle.net/10261/330490reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Inglés#PLACEHOLDER_PARENT_METADATA_VALUE#info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PCI2018-092938http://dx.doi.org/10.3390/plants12030527Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3304902026-05-22T06:33:51Z
dc.title.none.fl_str_mv Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
title Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
spellingShingle Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
Alcalá Herrera, Rafael
Vineyard
Cover vegetation
Ecosystem functions
Nutrient cycling
Soil bacteria
title_short Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
title_full Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
title_fullStr Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
title_full_unstemmed Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
title_sort Role of agricultural management in the provision of ecosystem services in warm climate vineyards: functional prediction of genes involved in nutrient cycling and carbon sequestration
dc.creator.none.fl_str_mv Alcalá Herrera, Rafael
Moreno Sánchez, Beatriz
Aguirrebegoa Barreña, Martin
Winter, S.
Robles Cruz, Ana Belén
Ramos Font, María Eugenia
Benítez León, Emilio
author Alcalá Herrera, Rafael
author_facet Alcalá Herrera, Rafael
Moreno Sánchez, Beatriz
Aguirrebegoa Barreña, Martin
Winter, S.
Robles Cruz, Ana Belén
Ramos Font, María Eugenia
Benítez León, Emilio
author_role author
author2 Moreno Sánchez, Beatriz
Aguirrebegoa Barreña, Martin
Winter, S.
Robles Cruz, Ana Belén
Ramos Font, María Eugenia
Benítez León, Emilio
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Ministerio de Ciencia e Innovación (España)
European Commission
Netherlands Organization for Scientific Research
National Science Foundation (US)
Executive Unit for Financing Higher Education, Research, Development and Innovation (Romania)
Belmont Forum
BiodivERsA
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Vineyard
Cover vegetation
Ecosystem functions
Nutrient cycling
Soil bacteria
topic Vineyard
Cover vegetation
Ecosystem functions
Nutrient cycling
Soil bacteria
description (1) Background: Maintaining soil fertility and crop productivity using natural microbial diversity could be a feasible approach for achieving sustainable development in agriculture. In this study, we compared soils from vineyards under organic and conventional management by predicting functional profiles through metagenomic analysis based on the 16S rRNA gene. (2) Methods: The structure, diversity and predictive functions of soil bacteria related to the biogeochemical cycle of the soil were analyzed, including oxidative and hydrolytic C-cycling enzymes, N-cycling enzymes and P-cycling enzymes. The inter-row spontaneous vegetation in the organic vineyards was also characterized. (3) Results: A clear effect of the farming system (organic vs. conventional) and cover management (herbicides plus tillage, mowing only and mowing plus tillage) on bacterial beta diversity and predicted functions was evidenced. While conventional viticulture increased the potential capacity of the soil to regulate the cycling of inorganic forms of N, organic viticulture in general enhanced those functions involving organic N, P and C substrates. Although the soil bacterial community responded differently to contrasting soil management strategies, nutrient cycling and carbon sequestration functions remained preserved, suggesting a high bacterial functional redundancy in the soil in any case. However, most of the predicted bacterial functions related to soil organic matter turnover were enhanced by organic management. (4) Conclusions: We posit the potential for organic viticulture to adequately address climate change adaptation in the context of sustainable agriculture.
publishDate 2023
dc.date.none.fl_str_mv 2023
2023
2023
2023
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
format article
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/330490
url http://hdl.handle.net/10261/330490
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv #PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PCI2018-092938
http://dx.doi.org/10.3390/plants12030527
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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