The revisited genome of bacillus subtilis bacteriophage SPP1

Bacillus subtilis bacteriophage SPP1 is a lytic siphovirus first described 50 years ago. Its complete DNA sequence was reported in 1997. Here we present an updated annotation of the 44,016 bp SPP1 genome and its correlation to different steps of the viral multiplication process. Five early polycistr...

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Detalles Bibliográficos
Autores: Godinho, Lia M., El Sadek Fadel, Mehdi, Monniot, Céline, Jakutyte, Lina, Auzat, Isabelle, Labarde, Audrey, Djacem, Karima, Oliveira, Leonor, Carballido-Lopez, Rut, Ayora, Silvia, Tavares, Paulo
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2018
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/173603
Acceso en línea:http://hdl.handle.net/10261/173603
Access Level:acceso abierto
Palabra clave:Bacteriophage
Siphoviridae
SPP1
Bacillus subtilis
Genome organization
DNA replication
Virus assembly
Virus DNA packaging
Virus evolution
Descripción
Sumario:Bacillus subtilis bacteriophage SPP1 is a lytic siphovirus first described 50 years ago. Its complete DNA sequence was reported in 1997. Here we present an updated annotation of the 44,016 bp SPP1 genome and its correlation to different steps of the viral multiplication process. Five early polycistronic transcriptional units encode phage DNA replication proteins and lysis functions together with less characterized, mostly non-essential, functions. Late transcription drives synthesis of proteins necessary for SPP1 viral particles assembly and for cell lysis, together with a short set of proteins of unknown function. The extensive genetic, biochemical and structural biology studies on the molecular mechanisms of SPP1 DNA replication and phage particle assembly rendered it a model system for tailed phages research. We propose SPP1 as the reference species for a new SPP1-like viruses genus of the Siphoviridae family.