Annotated genes Aphanius iberus genome as part of "De novo genome hybrid assembly and annotation of the endangered and euryhaline fish Aphanius iberus (Valenciennes, 1846) reveals critical genes on salinity adaptation"
[Description of methods used for collection/generation of data] A hybrid assembly approach was employed, integrating PacBio long-read sequencing with Illumina short-read data, an extensive functional annotation of the genome is provided by using AUGUSTUS with InterProScan and Sma3s.
| Autores: | , , , |
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| Tipo de recurso: | conjunto de datos |
| Fecha de publicación: | 2021 |
| País: | España |
| Institución: | Consejo Superior de Investigaciones Científicas (CSIC) |
| Repositorio: | DIGITAL.CSIC. Repositorio Institucional del CSIC |
| OAI Identifier: | oai:digital.csic.es:10261/365271 |
| Acceso en línea: | http://hdl.handle.net/10261/365271 https://doi.org/10.20350/digitalCSIC/16513 |
| Access Level: | acceso abierto |
| Palabra clave: | WGS Annotation Reference Genome Aphanius iberus De novo hybrid assembly |
| Sumario: | [Description of methods used for collection/generation of data] A hybrid assembly approach was employed, integrating PacBio long-read sequencing with Illumina short-read data, an extensive functional annotation of the genome is provided by using AUGUSTUS with InterProScan and Sma3s. |
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