A comparative encyclopedia of DNA elements in the mouse genome

The laboratory mouse shares the majority of its protein-coding genes with humans, making it the premier model organism in biomedical research, yet the two mammals differ in significant ways. To gain greater insights into both shared and species-specific transcriptional and cellular regulatory progra...

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Detalles Bibliográficos
Autores: Yue, Feng, Breschi, Alessandra, 1988-, Pervouchine, Dmitri D., Djebali, Sarah, Prieto Barja, Pablo, 1986-, Lagarde, Julien, Bussotti, Giovanni, 1983-, Tanzer, Andrea, Notredame, Cedric, Guigó Serra, Roderic, Ren, Bing, The Mouse Encyclopedia of DNA Elements (ENCODE) Consortium
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2014
País:España
Institución:Varias* (Consorci de Biblioteques Universitáries de Catalunya, Centre de Serveis Científics i Acadèmics de Catalunya)
Repositorio:Recercat. Dipósit de la Recerca de Catalunya
OAI Identifier:oai:recercat.cat:10230/34610
Acceso en línea:http://hdl.handle.net/10230/34610
http://dx.doi.org/10.1038/nature13992
Access Level:acceso abierto
Palabra clave:Epigenomics
Mouse genome
Descripción
Sumario:The laboratory mouse shares the majority of its protein-coding genes with humans, making it the premier model organism in biomedical research, yet the two mammals differ in significant ways. To gain greater insights into both shared and species-specific transcriptional and cellular regulatory programs in the mouse, the Mouse ENCODE Consortium has mapped transcription, DNase I hypersensitivity, transcription factor binding, chromatin modifications and replication domains throughout the mouse genome in diverse cell and tissue types. By comparing with the human genome, we not only confirm substantial conservation in the newly annotated potential functional sequences, but also find a large degree of divergence of sequences involved in transcriptional regulation, chromatin state and higher order chromatin organization. Our results illuminate the wide range of evolutionary forces acting on genes and their regulatory regions, and provide a general resource for research into mammalian biology and mechanisms of human diseases.