Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile

14 páginas, 4 figuras, 2 tablas

Detalhes bibliográficos
Autores: Razmilic, Valeria, Nouioui, Imen, Karlyshev, Andrey, Jawad, Rana, Trujillo, Martha E, Igual, José Mariano, Andrews, Barbara A., Asenjo, Juan A., Carro, Lorena, Goodfellow, Michael
Formato: artículo
Estado:Versión publicada
Fecha de publicación:2023
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/347897
Acesso em linha:http://hdl.handle.net/10261/347897
https://api.elsevier.com/content/abstract/scopus_id/85178936235
Access Level:acceso abierto
Palavra-chave:Atacama Desert
Micromonospora
Rhizosphere
Specialized metabolites
Taxonomic description
id ES_8f516f9545a68325dcc2ee8d0dff8b1f
oai_identifier_str oai:digital.csic.es:10261/347897
network_acronym_str ES
network_name_str España
repository_id_str
spelling Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in ChileRazmilic, ValeriaNouioui, ImenKarlyshev, AndreyJawad, RanaTrujillo, Martha EIgual, José MarianoAndrews, Barbara A.Asenjo, Juan A.Carro, LorenaGoodfellow, MichaelAtacama DesertMicromonosporaRhizosphereSpecialized metabolitesTaxonomic description14 páginas, 4 figuras, 2 tablasTwo novel Micromonospora strains, STR1-7T and STR1S-6T, were isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Atacama Desert, Chile. Chemotaxonomic, cultural and phenotypic features confirmed that the isolates belonged to the genus Micromonospora. They grew from 20 to 37 °C, from pH7 to 8 and in the presence of up to 3 %, w/v NaCl. The isolates formed distinct branches in Micromonospora gene trees based on 16S rRNA gene sequences and on a multi-locus sequence analysis of conserved house-keeping genes. A phylogenomic tree generated from the draft genomes of the isolates and their closest phylogenetic neighbours showed that isolate STR1-7T is most closely related to Micromonospora orduensis S2509T, and isolate STR1S-6 T forms a distinct branch that is most closely related to 12 validly named Micromonospora species, including Micromonospora saelicesensis the earliest proposed member of the group. The isolates were separated from one another and from their closest phylogenomic neighbours using a combination of chemotaxonomic, genomic and phenotypic features, and by low average nucleotide index and digital DNA-DNA hybridization values. Consequently, it is proposed that isolates STR1-7T and STR1S-6T be recognized as representing new species in the genus Micromonospora, namely as Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov.; the type strains are STR1-7T (=CECT 9665T=LMG 30768T) and STR1S-6T (=CECT 9666T=LMG 30770T), respectively. Genome mining showed that the isolates have the capacity to produce novel specialized metabolites, notably antibiotics and compounds that promote plant growth, as well as a broad-range of stress-related genes that provide an insight into how they cope with harsh abiotic conditions that prevail in high-altitude Atacama Desert soils.Peer reviewedMicrobiology SocietyIgual, José Mariano [0000-0002-5080-0378]Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202420242023info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionhttp://hdl.handle.net/10261/347897https://api.elsevier.com/content/abstract/scopus_id/85178936235reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)InglésInternational journal of systematic and evolutionary microbiologyhttp://dx.doi.org/10.1099/ijsem.0.006189Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3478972026-05-22T06:33:51Z
dc.title.none.fl_str_mv Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
title Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
spellingShingle Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
Razmilic, Valeria
Atacama Desert
Micromonospora
Rhizosphere
Specialized metabolites
Taxonomic description
title_short Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
title_full Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
title_fullStr Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
title_full_unstemmed Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
title_sort Micromonospora parastrephiae sp. nov. and Micromonospora tarensis sp. nov., isolated from the rhizosphere of a Parastrephia quadrangularis plant growing in the Salar de Tara region of the Central Andes in Chile
dc.creator.none.fl_str_mv Razmilic, Valeria
Nouioui, Imen
Karlyshev, Andrey
Jawad, Rana
Trujillo, Martha E
Igual, José Mariano
Andrews, Barbara A.
Asenjo, Juan A.
Carro, Lorena
Goodfellow, Michael
author Razmilic, Valeria
author_facet Razmilic, Valeria
Nouioui, Imen
Karlyshev, Andrey
Jawad, Rana
Trujillo, Martha E
Igual, José Mariano
Andrews, Barbara A.
Asenjo, Juan A.
Carro, Lorena
Goodfellow, Michael
author_role author
author2 Nouioui, Imen
Karlyshev, Andrey
Jawad, Rana
Trujillo, Martha E
Igual, José Mariano
Andrews, Barbara A.
Asenjo, Juan A.
Carro, Lorena
Goodfellow, Michael
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Igual, José Mariano [0000-0002-5080-0378]
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Atacama Desert
Micromonospora
Rhizosphere
Specialized metabolites
Taxonomic description
topic Atacama Desert
Micromonospora
Rhizosphere
Specialized metabolites
Taxonomic description
description 14 páginas, 4 figuras, 2 tablas
publishDate 2023
dc.date.none.fl_str_mv 2023
2024
2024
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/347897
https://api.elsevier.com/content/abstract/scopus_id/85178936235
url http://hdl.handle.net/10261/347897
https://api.elsevier.com/content/abstract/scopus_id/85178936235
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv International journal of systematic and evolutionary microbiology
http://dx.doi.org/10.1099/ijsem.0.006189
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Microbiology Society
publisher.none.fl_str_mv Microbiology Society
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1869413201673715712
score 15,811543

Registos relacionados