Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces

15 Pags.- 5 Figs.- 4 Tabls. Data availability statement: The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/Supplementary Material. © 2023 Martínez-García, Mas-Gómez, Prudencio, Barriu...

Descripción completa

Detalles Bibliográficos
Autores: Martínez-García, Pedro J., Mas-Gómez, Jorge, Prudencio, Ángela S., Barriuso, Juan José, Cantín, Celia M.
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2023
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/344582
Acceso en línea:http://hdl.handle.net/10261/344582
Access Level:acceso abierto
Palabra clave:brown rot
cuticle
disease resistance
hypersensitive response
SNP
Spanish germplasm
peaches
germplasm banks
http://vocabularies.unesco.org/thesaurus/concept11238
http://vocabularies.unesco.org/thesaurus/concept1766
id ES_82556ee82fbcc4f5b66dffb3554aeb13
oai_identifier_str oai:digital.csic.es:10261/344582
network_acronym_str ES
network_name_str España
repository_id_str
spelling Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landracesMartínez-García, Pedro J.Mas-Gómez, JorgePrudencio, Ángela S.Barriuso, Juan JoséCantín, Celia M.brown rotcuticledisease resistancehypersensitive responseSNPSpanish germplasmpeachesgermplasm bankshttp://vocabularies.unesco.org/thesaurus/concept11238http://vocabularies.unesco.org/thesaurus/concept176615 Pags.- 5 Figs.- 4 Tabls. Data availability statement: The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/Supplementary Material. © 2023 Martínez-García, Mas-Gómez, Prudencio, Barriuso and Cantín. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY).Brown rot, caused by the Monilinia spp., is the disease that causes the greatest losses in stone fruit worldwide. Currently, M. fructicola has become the dominant species in the main peach production area in Spain. The fruit cuticle is the first barrier of protection against external aggressions and may have a key role in the susceptibility to brown rot. However, information on the role of skin fruit on the resistance to brown rot in peach is scarce. Previous genetic analyses in peach have demonstrated that brown rot resistance is a complex and quantitative trait in which different fruit parts and resistance mechanisms are involved. To search for genomic areas involved in the control of the cultivar susceptibility to brown rot and to elucidate the role of fruit skin against this infection, we have studied, for two consecutive seasons (2019 and 2020), the fruit susceptibility to M. fructicola, together with fruit cuticle thickness (CT) and density (CD), in a collection of 80 Spanish and 5 foreign peach cultivars from the National Peach Collection at CITA (Zaragoza, Spain). Brown rot incidence, lesion diameter, and severity index were calculated after 5 days of inoculation on non-wounded fruit. The peach collection has also been genotyped using the new peach SNP chip (9 + 9K). Genotypic and phenotypic data have been used to perform a genome-wide association analysis (GWAS). Phenotyping has shown a wide variability on the brown rot susceptibility within the Spanish germplasm as well as on CD and CT. The GWAS results have identified several significant SNPs associated with disease severity index (DSI), CD, and CT, five of which were considered as reliable SNP-trait associations. A wide protein network analysis, using 127 genes within the regions of the reliable SNPs and previously identified candidate genes (169) associated with Monilinia spp. resistance, highlighted several genes involved in classical hypersensitive response (HR), genes related to wax layers as ceramidases and lignin precursors catalyzers, and a possible role of autophagy during brown rot infection. This work adds relevant information on the complexity resistance mechanisms to brown rot infection in peach fruits and the genetics behind them.This study was supported by Grant RTI-2018-094176-R-C31/C32/C33 funded by MCIN/AEI/10.13039/501100011033 and by “ERDF A way of making EUROPE”.Peer reviewedFrontiers MediaMinisterio de Ciencia e Innovación (España)European CommissionCantín Mardones, Celia M. [0000-0001-9911-0194]Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202420242023info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionhttp://hdl.handle.net/10261/344582reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)InglésThe underlying dataset has been published as supplementary material of the article in the publisher platform at DOI: https://doi.org/10.3389/fpls.2023.1165847https://doi.org/10.3389/fpls.2023.1165847Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3445822026-05-22T06:33:51Z
dc.title.none.fl_str_mv Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
title Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
spellingShingle Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
Martínez-García, Pedro J.
brown rot
cuticle
disease resistance
hypersensitive response
SNP
Spanish germplasm
peaches
germplasm banks
http://vocabularies.unesco.org/thesaurus/concept11238
http://vocabularies.unesco.org/thesaurus/concept1766
title_short Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
title_full Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
title_fullStr Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
title_full_unstemmed Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
title_sort Genome-wide association analysis of Monilinia fructicola lesion in a collection of Spanish peach landraces
dc.creator.none.fl_str_mv Martínez-García, Pedro J.
Mas-Gómez, Jorge
Prudencio, Ángela S.
Barriuso, Juan José
Cantín, Celia M.
author Martínez-García, Pedro J.
author_facet Martínez-García, Pedro J.
Mas-Gómez, Jorge
Prudencio, Ángela S.
Barriuso, Juan José
Cantín, Celia M.
author_role author
author2 Mas-Gómez, Jorge
Prudencio, Ángela S.
Barriuso, Juan José
Cantín, Celia M.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Ministerio de Ciencia e Innovación (España)
European Commission
Cantín Mardones, Celia M. [0000-0001-9911-0194]
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv brown rot
cuticle
disease resistance
hypersensitive response
SNP
Spanish germplasm
peaches
germplasm banks
http://vocabularies.unesco.org/thesaurus/concept11238
http://vocabularies.unesco.org/thesaurus/concept1766
topic brown rot
cuticle
disease resistance
hypersensitive response
SNP
Spanish germplasm
peaches
germplasm banks
http://vocabularies.unesco.org/thesaurus/concept11238
http://vocabularies.unesco.org/thesaurus/concept1766
description 15 Pags.- 5 Figs.- 4 Tabls. Data availability statement: The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found in the article/Supplementary Material. © 2023 Martínez-García, Mas-Gómez, Prudencio, Barriuso and Cantín. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY).
publishDate 2023
dc.date.none.fl_str_mv 2023
2024
2024
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/344582
url http://hdl.handle.net/10261/344582
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv The underlying dataset has been published as supplementary material of the article in the publisher platform at DOI: https://doi.org/10.3389/fpls.2023.1165847
https://doi.org/10.3389/fpls.2023.1165847
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Frontiers Media
publisher.none.fl_str_mv Frontiers Media
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1869412038959169536
score 15,811543

Similares en LA Referencia