Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species

Rambla Nebot, Jose Luis; Fernandez Del Carmen, Maria Asuncion|||0000-0002-9202-4960; Primo Millo, Jaime|||0000-0003-2254-8184; Monforte Gilabert, Antonio José|||0000-0003-3461-3094; GRANELL RICHART, ANTONIO|||0000-0003-4266-9581; Medina, Aurora; Barrantes, Walter; Grandillo, Silvana; Cammareri, Maria; López Casado, Gloria; Rodrigo Tarrega, Guillermo; Alonso, Arancha; Garcia-Martinez, S; Ruiz, JJ; Fernandez-Muñoz, R

Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species

[EN] Volatile organic compounds (VOCs) are major determinants of fruit flavor, a primary objective in tomato breeding. A recombinant inbred line (RIL) population consisting of 169 lines derived from a cross between Solanum lycopersicum and a red-fruited wild tomato species Solanum pimpinellifolium a...

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Autores:	Rambla Nebot, Jose Luis, Fernandez Del Carmen, Maria Asuncion\|\|\|0000-0002-9202-4960, Primo Millo, Jaime\|\|\|0000-0003-2254-8184, Monforte Gilabert, Antonio José\|\|\|0000-0003-3461-3094, GRANELL RICHART, ANTONIO\|\|\|0000-0003-4266-9581, Medina, Aurora, Barrantes, Walter, Grandillo, Silvana, Cammareri, Maria, López Casado, Gloria, Rodrigo Tarrega, Guillermo, Alonso, Arancha, Garcia-Martinez, S, Ruiz, JJ, Fernandez-Muñoz, R
Tipo de recurso:	artículo
Fecha de publicación:	2016
País:	España
Institución:	Universitat Politècnica de València (UPV)
Repositorio:	RiuNet. Repositorio Institucional de la Universitat Politécnica de Valéncia
Idioma:	inglés
OAI Identifier:	oai:riunet.upv.es:10251/80562
Acceso en línea:	https://riunet.upv.es/handle/10251/80562
Access Level:	acceso abierto
Palabra clave:	Fruit flavor introgression lines (ILs) quantitative trait loci (QTLs) recombinant inbred lines (RILs) Solanum habrochaites Solanum pimpinellifolium SolCap tomato SNP array tomato volatiles QUIMICA ORGANICA

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network_acronym_str	ES
network_name_str	España
repository_id_str
dc.title.none.fl_str_mv	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
title	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
spellingShingle	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species Rambla Nebot, Jose Luis Fruit flavor introgression lines (ILs) quantitative trait loci (QTLs) recombinant inbred lines (RILs) Solanum habrochaites Solanum pimpinellifolium SolCap tomato SNP array tomato volatiles QUIMICA ORGANICA
title_short	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
title_full	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
title_fullStr	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
title_full_unstemmed	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
title_sort	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species
dc.creator.none.fl_str_mv	Rambla Nebot, Jose Luis Fernandez Del Carmen, Maria Asuncion\|\|\|0000-0002-9202-4960 Primo Millo, Jaime\|\|\|0000-0003-2254-8184 Monforte Gilabert, Antonio José\|\|\|0000-0003-3461-3094 GRANELL RICHART, ANTONIO\|\|\|0000-0003-4266-9581 Medina, Aurora Barrantes, Walter Grandillo, Silvana Cammareri, Maria López Casado, Gloria Rodrigo Tarrega, Guillermo Alonso, Arancha Garcia-Martinez, S Ruiz, JJ Fernandez-Muñoz, R
author	Rambla Nebot, Jose Luis
author_facet	Rambla Nebot, Jose Luis Fernandez Del Carmen, Maria Asuncion\|\|\|0000-0002-9202-4960 Primo Millo, Jaime\|\|\|0000-0003-2254-8184 Monforte Gilabert, Antonio José\|\|\|0000-0003-3461-3094 GRANELL RICHART, ANTONIO\|\|\|0000-0003-4266-9581 Medina, Aurora Barrantes, Walter Grandillo, Silvana Cammareri, Maria López Casado, Gloria Rodrigo Tarrega, Guillermo Alonso, Arancha Garcia-Martinez, S Ruiz, JJ Fernandez-Muñoz, R
author_role	author
author2	Fernandez Del Carmen, Maria Asuncion\|\|\|0000-0002-9202-4960 Primo Millo, Jaime\|\|\|0000-0003-2254-8184 Monforte Gilabert, Antonio José\|\|\|0000-0003-3461-3094 GRANELL RICHART, ANTONIO\|\|\|0000-0003-4266-9581 Medina, Aurora Barrantes, Walter Grandillo, Silvana Cammareri, Maria López Casado, Gloria Rodrigo Tarrega, Guillermo Alonso, Arancha Garcia-Martinez, S Ruiz, JJ Fernandez-Muñoz, R
author2_role	author author author author author author author author author author author author author author
dc.contributor.none.fl_str_mv	Instituto Universitario Mixto de Biología Molecular y Celular de Plantas Instituto Agroforestal Mediterráneo Departamento de Química Escuela Técnica Superior de Ingeniería Industrial European Commission Ministerio de Economía y Competitividad Repositorio Institucional de la Universitat Politècnica de València Riunet
dc.subject.none.fl_str_mv	Fruit flavor introgression lines (ILs) quantitative trait loci (QTLs) recombinant inbred lines (RILs) Solanum habrochaites Solanum pimpinellifolium SolCap tomato SNP array tomato volatiles QUIMICA ORGANICA
topic	Fruit flavor introgression lines (ILs) quantitative trait loci (QTLs) recombinant inbred lines (RILs) Solanum habrochaites Solanum pimpinellifolium SolCap tomato SNP array tomato volatiles QUIMICA ORGANICA
description	[EN] Volatile organic compounds (VOCs) are major determinants of fruit flavor, a primary objective in tomato breeding. A recombinant inbred line (RIL) population consisting of 169 lines derived from a cross between Solanum lycopersicum and a red-fruited wild tomato species Solanum pimpinellifolium accession (SP) was characterized for VOCs in three different seasons. Correlation and hierarchical cluster analyses were performed on the 52 VOCs identified, providing a tool for the putative assignation of individual compounds to metabolic pathways. Quantitative trait locus (QTL) analysis, based on a genetic linkage map comprising 297 single nucleotide polymorphisms (SNPs), revealed 102 QTLs (75% not described previously) corresponding to 39 different VOCs. The SP alleles exerted a positive effect on most of the underlying apocarotenoid volatile QTLs-regarded as desirable for liking tomato-indicating that alleles inherited from SP are a valuable resource for flavor breeding. An introgression line (IL) population developed from the same parental genotypes provided 12 ILs carrying a single SP introgression and covering 85 VOC QTLs, which were characterized at three locations. The results showed that almost half of the QTLs previously identified in the RILs maintained their effect in an IL form, reinforcing the value of these QTLs for flavor/aroma breeding in cultivated tomato.
publishDate	2016
dc.date.none.fl_str_mv	2016 2016-01-01
dc.type.none.fl_str_mv	journal article http://purl.org/coar/resource_type/c_6501 VoR http://purl.org/coar/version/c_970fb48d4fbd8a85
dc.type.openaire.fl_str_mv	info:eu-repo/semantics/article
format	article
dc.identifier.none.fl_str_mv	https://riunet.upv.es/handle/10251/80562
url	https://riunet.upv.es/handle/10251/80562
dc.language.none.fl_str_mv	Inglés eng
language_invalid_str_mv	Inglés
language	eng
dc.relation.none.fl_str_mv	European Commission https://doi.org/10.13039/501100000780 H2020 634561 Traditional tomato varieties and cultural practices: a case for agricultural diversification with impact on food security and health of European population Ministerio de Economía y Competitividad http://dx.doi.org/10.13039/501100003329 AGL2015-65246-R BASES GENETICAS DE LA COMPOSICION Y PROPIEDADES BIOFISICAS DE LA CUTICULA DEL FRUTO DE TOMATE: APROVECHAMIENTO DE LA VARIABILIDAD NATURAL Ministerio de Ciencia e Innovación http://dx.doi.org/10.13039/501100004837 AGL2011-26957 MEJORA DE LA CALIDAD EN TOMATE: ANALISIS GENETICO Y DE METABOLITOS DEL EFECTO DE LA INTRODUCCION DE RESISTENCIAS Y GENETICA DE ASOCIACION EN VARIEDADES ESPAÑOLAS E ITALIANAS
dc.rights.none.fl_str_mv	open access http://purl.org/coar/access_right/c_abf2 Reconocimiento (by) http://creativecommons.org/licenses/by/4.0/
dc.rights.openaire.fl_str_mv	info:eu-repo/semantics/openAccess
rights_invalid_str_mv	open access http://purl.org/coar/access_right/c_abf2 Reconocimiento (by) http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv	openAccess
dc.format.none.fl_str_mv	application/pdf
dc.publisher.none.fl_str_mv	Oxford University Press (OUP)
publisher.none.fl_str_mv	Oxford University Press (OUP)
dc.source.none.fl_str_mv	reponame:RiuNet. Repositorio Institucional de la Universitat Politécnica de Valéncia instname:Universitat Politècnica de València (UPV)
instname_str	Universitat Politècnica de València (UPV)
reponame_str	RiuNet. Repositorio Institucional de la Universitat Politécnica de Valéncia
collection	RiuNet. Repositorio Institucional de la Universitat Politécnica de Valéncia
repository.name.fl_str_mv
repository.mail.fl_str_mv
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spelling	Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato speciesRambla Nebot, Jose LuisFernandez Del Carmen, Maria Asuncion\|\|\|0000-0002-9202-4960Primo Millo, Jaime\|\|\|0000-0003-2254-8184Monforte Gilabert, Antonio José\|\|\|0000-0003-3461-3094GRANELL RICHART, ANTONIO\|\|\|0000-0003-4266-9581Medina, AuroraBarrantes, WalterGrandillo, SilvanaCammareri, MariaLópez Casado, GloriaRodrigo Tarrega, GuillermoAlonso, AranchaGarcia-Martinez, SRuiz, JJFernandez-Muñoz, RFruit flavorintrogression lines (ILs)quantitative trait loci (QTLs)recombinant inbred lines (RILs)Solanum habrochaitesSolanum pimpinellifoliumSolCap tomato SNP arraytomatovolatilesQUIMICA ORGANICA[EN] Volatile organic compounds (VOCs) are major determinants of fruit flavor, a primary objective in tomato breeding. A recombinant inbred line (RIL) population consisting of 169 lines derived from a cross between Solanum lycopersicum and a red-fruited wild tomato species Solanum pimpinellifolium accession (SP) was characterized for VOCs in three different seasons. Correlation and hierarchical cluster analyses were performed on the 52 VOCs identified, providing a tool for the putative assignation of individual compounds to metabolic pathways. Quantitative trait locus (QTL) analysis, based on a genetic linkage map comprising 297 single nucleotide polymorphisms (SNPs), revealed 102 QTLs (75% not described previously) corresponding to 39 different VOCs. The SP alleles exerted a positive effect on most of the underlying apocarotenoid volatile QTLs-regarded as desirable for liking tomato-indicating that alleles inherited from SP are a valuable resource for flavor breeding. An introgression line (IL) population developed from the same parental genotypes provided 12 ILs carrying a single SP introgression and covering 85 VOC QTLs, which were characterized at three locations. The results showed that almost half of the QTLs previously identified in the RILs maintained their effect in an IL form, reinforcing the value of these QTLs for flavor/aroma breeding in cultivated tomato.We thank Erika Moro for valuable help in volatile analysis of the ILs. WB was supported by a fellowship granted by the Universidad de Costa Rica and CSIC-Spain by way of a collaboration agreement between CSIC/UCR. Volatile profiling was performed in the Metabolomic facilities of the IBMCP, CSIC (Spain). This work was supported in part by the Spanish MINECO Project AGL2015-65246-R co-financed by EU FEDER, MINECO Project AGL2011-26957, and the Bilateral agreements of Scientific and Technological Cooperation between the Spanish National Research Council (CSIC) and the Italian National Research Council (CNR). Funding for this project was provided through TRADITOM. TRADITOM has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 634561. Networking activities were supported by COST action Fruit Quality FA 1106.Oxford University Press (OUP)Instituto Universitario Mixto de Biología Molecular y Celular de PlantasInstituto Agroforestal MediterráneoDepartamento de QuímicaEscuela Técnica Superior de Ingeniería IndustrialEuropean CommissionMinisterio de Economía y CompetitividadRepositorio Institucional de la Universitat Politècnica de València Riunet20162016-01-01journal articlehttp://purl.org/coar/resource_type/c_6501VoRhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleapplication/pdfhttps://riunet.upv.es/handle/10251/80562reponame:RiuNet. Repositorio Institucional de la Universitat Politécnica de Valénciainstname:Universitat Politècnica de València (UPV)InglésengEuropean Commission https://doi.org/10.13039/501100000780 H2020 634561 Traditional tomato varieties and cultural practices: a case for agricultural diversification with impact on food security and health of European populationMinisterio de Economía y Competitividad http://dx.doi.org/10.13039/501100003329 AGL2015-65246-R BASES GENETICAS DE LA COMPOSICION Y PROPIEDADES BIOFISICAS DE LA CUTICULA DEL FRUTO DE TOMATE: APROVECHAMIENTO DE LA VARIABILIDAD NATURALMinisterio de Ciencia e Innovación http://dx.doi.org/10.13039/501100004837 AGL2011-26957 MEJORA DE LA CALIDAD EN TOMATE: ANALISIS GENETICO Y DE METABOLITOS DEL EFECTO DE LA INTRODUCCION DE RESISTENCIAS Y GENETICA DE ASOCIACION EN VARIEDADES ESPAÑOLAS E ITALIANASopen accesshttp://purl.org/coar/access_right/c_abf2Reconocimiento (by)http://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessoai:riunet.upv.es:10251/805622026-06-13T07:49:27Z
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Identification, introgression, and validation of fruit volatile QTLs from a red-fruited wild tomato species

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