Supplementary materials of Comparative metagenomics of phytoplankton blooms after nutrient enrichment of oligotrophic marine waters

Figure S1. Relative abundance of open reading frames (ORFS) taxonomically classified at the phylum level (ORFs required annotation at least to the kingdom level). Only the top 15 taxa were shown.-- Figure S2. Venn diagram depicting the shared and unique KEGG IDs amongst nutrient treatments. NP = the...

Descripción completa

Detalles Bibliográficos
Autores: Pearman, John K., Casas Castaño, Laura, Michell, Craig, Aldanondo, Naroa, Mojib, Nazia, Holtermann, Karie, Georgakakis, Ioannis, Curdia, Joao, Carvalho, Susana, Gusti, Amr, Irigoien, Xabier
Tipo de recurso: conjunto de datos
Fecha de publicación:2022
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/357202
Acceso en línea:http://hdl.handle.net/10261/357202
Access Level:acceso abierto
Descripción
Sumario:Figure S1. Relative abundance of open reading frames (ORFS) taxonomically classified at the phylum level (ORFs required annotation at least to the kingdom level). Only the top 15 taxa were shown.-- Figure S2. Venn diagram depicting the shared and unique KEGG IDs amongst nutrient treatments. NP = the single nitrate and phosphate addition; NP.cont = the continuous nitrate and phosphate addition; NPS = the single nitrate, phosphate and silicate addition; and NPS.cont = the continuous nitrate, phosphate and silicate (NPS.cont) addition.-- Figure S3. Changes in the abundance of enzymes (RPM = reads per million) involved in A) assimilatory nitrate reduction and B) dissimilatory nitrate reduction over time for the various treatments. NP = the single nitrate and phosphate addition; NP.cont = the continuous nitrate and phosphate addition; NPS = the single nitrate, phosphate and silicate addition; and NPS.cont = the continuous nitrate, phosphate and silicate (NPS.cont) addition.-- Figure S4. The changes in abundance (RPM = reads per million) of antenna proteins over time. AP = Allophycocyanin, PC = Phycocyanin, PEC = Phycoerythrocyanin, PE = Phycoerythrin and LHC = Light harvesting chlorophyll protein complex. NP = the single nitrate and phosphate addition; NP.cont = the continuous nitrate and phosphate addition; NPS = the single nitrate, phosphate and silicate addition; and NPS.cont = the continuous nitrate, phosphate and silicate (NPS.cont) addition.-- Figure S5. Temporal dynamics of oxidative phosphorylation related enzymes for each of the treatments. RPM = reads per million; NP = the single nitrate and phosphate addition; NP.cont = the continuous nitrate and phosphate addition; NPS = the single nitrate, phosphate and silicate addition; and NPS.cont = the continuous nitrate, phosphate and silicate (NPS.cont) addition.-- Table S1. Metadata of the samples taken during the mesocosm experiment.-- Table S2. KEGG IDs that were used in the analysis of temporal patterns of select metabolic pathways.-- Table S3. Sequencing, assembly and annotation results.-- Table S4. The percentage abundance per replicate of the top taxonomic classes per day and treatment

Similares en LA Referencia