Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes

© 2023 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/bync-nd/4.0/).

Detalles Bibliográficos
Autores: Mochales-Riaño, Gabriel, Burriel-Carranza, Bernat, Barros, Margarida, Velo-Antón, Guillermo, Talavera, Adrián, Spilani, Loukia, Tejero-Cicuéndez, Héctor, Crochet, Pierre-André, Piris, Alberto, García-Cardenete, Luis, Busais, Salem, Els, Johannes, Shobrak, Mohammed, Brito, José Carlos, Šmíd, Jiří, Carranza, Salvador, Martínez-Freiría, Fernando
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2024
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/347573
Acceso en línea:http://hdl.handle.net/10261/347573
https://api.elsevier.com/content/abstract/scopus_id/85179395689
Access Level:acceso abierto
Palabra clave:ddRAD
Introgression
Phylogenomics
Viperidae
id ES_7517e18970917aacec3f43b671d8df4a
oai_identifier_str oai:digital.csic.es:10261/347573
network_acronym_str ES
network_name_str España
repository_id_str
dc.title.none.fl_str_mv Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
title Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
spellingShingle Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
Mochales-Riaño, Gabriel
ddRAD
Introgression
Phylogenomics
Viperidae
title_short Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
title_full Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
title_fullStr Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
title_full_unstemmed Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
title_sort Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus Cerastes
dc.creator.none.fl_str_mv Mochales-Riaño, Gabriel
Burriel-Carranza, Bernat
Barros, Margarida
Velo-Antón, Guillermo
Talavera, Adrián
Spilani, Loukia
Tejero-Cicuéndez, Héctor
Crochet, Pierre-André
Piris, Alberto
García-Cardenete, Luis
Busais, Salem
Els, Johannes
Shobrak, Mohammed
Brito, José Carlos
Šmíd, Jiří
Carranza, Salvador
Martínez-Freiría, Fernando
author Mochales-Riaño, Gabriel
author_facet Mochales-Riaño, Gabriel
Burriel-Carranza, Bernat
Barros, Margarida
Velo-Antón, Guillermo
Talavera, Adrián
Spilani, Loukia
Tejero-Cicuéndez, Héctor
Crochet, Pierre-André
Piris, Alberto
García-Cardenete, Luis
Busais, Salem
Els, Johannes
Shobrak, Mohammed
Brito, José Carlos
Šmíd, Jiří
Carranza, Salvador
Martínez-Freiría, Fernando
author_role author
author2 Burriel-Carranza, Bernat
Barros, Margarida
Velo-Antón, Guillermo
Talavera, Adrián
Spilani, Loukia
Tejero-Cicuéndez, Héctor
Crochet, Pierre-André
Piris, Alberto
García-Cardenete, Luis
Busais, Salem
Els, Johannes
Shobrak, Mohammed
Brito, José Carlos
Šmíd, Jiří
Carranza, Salvador
Martínez-Freiría, Fernando
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Ministerio de Ciencia e Innovación (España)
Agencia Estatal de Investigación (España)
European Commission
Ministerio de Ciencia, Innovación y Universidades (España)
Generalitat de Catalunya
La Caixa
Czech Science Foundation
Charles University (Czech Republic)
Fundação para a Ciência e a Tecnologia (Portugal)
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv ddRAD
Introgression
Phylogenomics
Viperidae
topic ddRAD
Introgression
Phylogenomics
Viperidae
description © 2023 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/bync-nd/4.0/).
publishDate 2024
dc.date.none.fl_str_mv 2024
2024
2024
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/347573
https://api.elsevier.com/content/abstract/scopus_id/85179395689
url http://hdl.handle.net/10261/347573
https://api.elsevier.com/content/abstract/scopus_id/85179395689
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv #PLACEHOLDER_PARENT_METADATA_VALUE#
#PLACEHOLDER_PARENT_METADATA_VALUE#
#PLACEHOLDER_PARENT_METADATA_VALUE#
#PLACEHOLDER_PARENT_METADATA_VALUE#
#PLACEHOLDER_PARENT_METADATA_VALUE#
#PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2021-2023/PID2021-128901NB-I00
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PGC2018-098290-B-I00
info:eu-repo/grantAgreement/AEI//PRE2019-088729
info:eu-repo/grantAgreement/AEI//FPU18
info:eu-repo/grantAgreement/AEI//FJC2021-046832-I
info:eu-repo/grantAgreement/AEI//RYC-2019-026959-I
The underlying dataset has been published as supplementary material of the article in the publisher platform at https://doi.org/10.1016/j.ympev.2023.107979
https://doi.org/10.1016/j.ympev.2023.107979
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1869410956087394304
spelling Hidden in the sand: Phylogenomics unravel an unexpected evolutionary history for the desert-adapted vipers of the genus CerastesMochales-Riaño, GabrielBurriel-Carranza, BernatBarros, MargaridaVelo-Antón, GuillermoTalavera, AdriánSpilani, LoukiaTejero-Cicuéndez, HéctorCrochet, Pierre-AndréPiris, AlbertoGarcía-Cardenete, LuisBusais, SalemEls, JohannesShobrak, MohammedBrito, José CarlosŠmíd, JiříCarranza, SalvadorMartínez-Freiría, FernandoddRADIntrogressionPhylogenomicsViperidae© 2023 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/bync-nd/4.0/).The desert vipers of the genus Cerastes are a small clade of medically important venomous snakes within the family Viperidae. According to published morphological and molecular studies, the group is comprised by four species: two morphologically similar and phylogenetically sister taxa, the African horned viper (Cerastes cerastes) and the Arabian horned viper (Cerastes gasperettii); a more distantly related species, the Saharan sand viper (Cerastes vipera), and the enigmatic Böhme's sand viper (Cerastes boehmei), only known from a single specimen in captivity allegedly captured in Central Tunisia. In this study, we sequenced one mitochondrial marker (COI) as well as genome-wide data (ddRAD sequencing) from 28 and 41 samples, respectively, covering the entire distribution range of the genus to explore the population genomics, phylogenomic relationships and introgression patterns within the genus Cerastes. Additionally, and to provide insights into the mode of diversification of the group, we carried out niche overlap analyses considering climatic and habitat variables. Both nuclear phylogenomic reconstructions and population structure analyses have unveiled an unexpected evolutionary history for the genus Cerastes, which sharply contradicts the morphological similarities and previously published mitochondrial approaches. Cerastes cerastes and C. vipera are recovered as sister taxa whilst C. gasperettii is a sister taxon to the clade formed by these two species. We found a relatively high niche overlap (OI > 0.7) in both climatic and habitat variables between C. cerastes and C. vipera, contradicting a potential scenario of sympatric speciation. These results are in line with the introgression found between the northwestern African populations of C. cerastes and C. vipera. Finally, our genomic data confirms the existence of a lineage of C. cerastes in Arabia. All these results highlight the importance of genome-wide data over few genetic markers to study the evolutionary history of species.This work was supported by grants PGC2018-098290-B-I00 (MCIU/AEI/FEDER, UE), Spain, PID2021-128901NB-I00 (MCIN/AEI/10.13039/501100011033 and by ERDF, A way of making Europe), Spain, and grant 2021-SGR-00751 from the Departament de Recerca i Universitats from the Generalitat de Catalunya, Spain to SC. GM-R is supported by an FPI grant from the Ministerio de Ciencia, Innovación y Universidades, Spain (PRE2019-088729), BB-C is supported by FPU grant from Ministerio de Ciencia, Innovación y Universidades, Spain (FPU18/04742), AT is supported by “la Caixa” doctoral fellowship program (LCF/BQ/DR20/11790007), HT-C is supported by a “Juan de la Cierva - Formación” postdoctoral fellowship (FJC2021-046832-I) funded by MCIN/AEI/10.13039/501100011033 and by the European Union NextGenerationEU/PRTR, GV-A was supported by the FCT (CEECIND/00937/2018) and recently by a Ramón y Cajal research grant (Ref. RYC-2019-026959-I/AEI/10.13039/501100011033), JŠ was supported by the Czech Science Foundation (GAČR) under grant number 22-12757S and by the Charles University Research Centre under grant number 204069 and FM-F and JCB are supported by FCT - Fundação para a Ciencia e Tecnologia de Portugal (DL57/2016/CP1440/CT0010, CEECINST/00014/2018/CP1512/CT0001, respectively).Peer reviewedElsevierMinisterio de Ciencia e Innovación (España)Agencia Estatal de Investigación (España)European CommissionMinisterio de Ciencia, Innovación y Universidades (España)Generalitat de CatalunyaLa CaixaCzech Science FoundationCharles University (Czech Republic)Fundação para a Ciência e a Tecnologia (Portugal)Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202420242024info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/10261/347573https://api.elsevier.com/content/abstract/scopus_id/85179395689reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Inglés#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2021-2023/PID2021-128901NB-I00info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PGC2018-098290-B-I00info:eu-repo/grantAgreement/AEI//PRE2019-088729info:eu-repo/grantAgreement/AEI//FPU18info:eu-repo/grantAgreement/AEI//FJC2021-046832-Iinfo:eu-repo/grantAgreement/AEI//RYC-2019-026959-IThe underlying dataset has been published as supplementary material of the article in the publisher platform at https://doi.org/10.1016/j.ympev.2023.107979https://doi.org/10.1016/j.ympev.2023.107979Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3475732026-05-22T06:33:51Z
score 15.811543

Similares en LA Referencia