Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave

10 páginas.- 1 figuras.- 3 tablas.- 41 referencias.- One supplementary table and four supplementary figures are available with the online version of this article.

Detalles Bibliográficos
Autores: Gutiérrez-Patricio, Sara, González-Pimentel, José Luis, Miller, A. Z., Hermosín, Bernardo, Sáiz-Jiménez, Cesáreo, Jurado, Valme
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2021
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/248630
Acceso en línea:http://hdl.handle.net/10261/248630
Access Level:acceso abierto
Palabra clave:Paracoccus
Proteobacteria
Show cave
Whole genome average nucleotide identity
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spelling Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show caveGutiérrez-Patricio, SaraGonzález-Pimentel, José LuisMiller, A. Z.Hermosín, BernardoSáiz-Jiménez, CesáreoJurado, ValmeParacoccusProteobacteriaShow caveWhole genome average nucleotide identity10 páginas.- 1 figuras.- 3 tablas.- 41 referencias.- One supplementary table and four supplementary figures are available with the online version of this article.A novel facultatively anaerobic, non-motile, Gram-stain-negative, non-endospore-forming alphaproteobacterium, strain 1011MAR3C25T, was isolated from a white biofilm colonizing the walls of the Andalusian show cave Gruta de las Maravillas (Huelva, Spain). Strain 1011MAR3C25T grew at 8–42 °C (optimum, 20–30 °C), at pH 5.0–9.0 (optimum, pH 5.0–6.0) and in the presence of 0–12 % (w/v) NaCl (optimum 3–5 %). Cells were catalase- and oxidase-positive. The strain grew heterotrophically with various carbon sources and chemoautotrophically with thiosulfate under aerobic conditions. Results of phylogenetic analysis showed that strain 1011MAR3C25T was related to Paracoccus saliphilus DSM 18447T and Paracoccus alkanivorans LMG 30882T (97.90 % and 97.32 % 16S rRNA sequence identity values, respectively). The major respiratory quinone was ubiquinone Q-10 and the predominant fatty acid was C18 : 1 ω7c. The polar lipid profile consisted of diphosphatidylglycerol, phosphatidylcholine, phosphatidylglycerol, an unidentified aminolipid, an unidentified glycolipid and an unidentified polar lipid. The DNA G+C content was 60.3 mol%. Based on a polyphasic taxonomic study it is proposed that strain 1011MAR3C25T (=CECT 9092T=LMG 29414T) represents a novel species of the genus Paracoccus, for which the name Paracoccus onubensis sp. nov. is proposed.This study was supported by project 0483_PROBIOMA_5_E, co-financed by the European Regional Development Fund within the framework of the Interreg V A Spain–Portugal program (POCTEP) 2014–2020Peer reviewedMicrobiology SocietyEuropean CommissionInterregGutierrez-Patricio, S. [0000-0002-4225-0708]González Pimentel, José L. [0000-0002-9687-3134]Miller, A. Z. [0000-0002-0553-8470]Hermosín, Bernardo [0000-0002-2147-6636]Sáiz-Jiménez, Cesáreo [0000-0003-0036-670X]Jurado, Valme [0000-0003-0972-9909]Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202120212021info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionhttp://hdl.handle.net/10261/248630reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Ingléshttp://dx.doi.org/10.1099/ijsem.0.004942Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/2486302026-05-22T06:33:51Z
dc.title.none.fl_str_mv Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
title Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
spellingShingle Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
Gutiérrez-Patricio, Sara
Paracoccus
Proteobacteria
Show cave
Whole genome average nucleotide identity
title_short Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
title_full Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
title_fullStr Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
title_full_unstemmed Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
title_sort Paracoccus onubensis sp. Nov., a novel alphaproteobacterium isolated from the wall of a show cave
dc.creator.none.fl_str_mv Gutiérrez-Patricio, Sara
González-Pimentel, José Luis
Miller, A. Z.
Hermosín, Bernardo
Sáiz-Jiménez, Cesáreo
Jurado, Valme
author Gutiérrez-Patricio, Sara
author_facet Gutiérrez-Patricio, Sara
González-Pimentel, José Luis
Miller, A. Z.
Hermosín, Bernardo
Sáiz-Jiménez, Cesáreo
Jurado, Valme
author_role author
author2 González-Pimentel, José Luis
Miller, A. Z.
Hermosín, Bernardo
Sáiz-Jiménez, Cesáreo
Jurado, Valme
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv European Commission
Interreg
Gutierrez-Patricio, S. [0000-0002-4225-0708]
González Pimentel, José L. [0000-0002-9687-3134]
Miller, A. Z. [0000-0002-0553-8470]
Hermosín, Bernardo [0000-0002-2147-6636]
Sáiz-Jiménez, Cesáreo [0000-0003-0036-670X]
Jurado, Valme [0000-0003-0972-9909]
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Paracoccus
Proteobacteria
Show cave
Whole genome average nucleotide identity
topic Paracoccus
Proteobacteria
Show cave
Whole genome average nucleotide identity
description 10 páginas.- 1 figuras.- 3 tablas.- 41 referencias.- One supplementary table and four supplementary figures are available with the online version of this article.
publishDate 2021
dc.date.none.fl_str_mv 2021
2021
2021
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/248630
url http://hdl.handle.net/10261/248630
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv http://dx.doi.org/10.1099/ijsem.0.004942
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Microbiology Society
publisher.none.fl_str_mv Microbiology Society
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 15,811543

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