Protein length distribution across the three superkingdoms of life [Dataset]
(A) Whole distribution for all proteins in Uniprot (Release 2023_01). (B) Inset of the Distribution, for protein lengths bigger than 5000 amino acids, by superkingdom. Relevant proteins are highlighted. (C) Plot of the relationship between the size of the proteome (number of proteins), at log scale,...
| Authors: | , |
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| Format: | conjunto de datos |
| Status: | Published version |
| Publication Date: | 2024 |
| Country: | España |
| Institution: | Consejo Superior de Investigaciones Científicas (CSIC) |
| Repository: | DIGITAL.CSIC. Repositorio Institucional del CSIC |
| OAI Identifier: | oai:digital.csic.es:10261/385316 |
| Online Access: | http://hdl.handle.net/10261/385316 |
| Access Level: | Open access |
| Keyword: | Protein length distribution 5000 amino acids Ribosomomal peptide synthesis div >< p Recognition surface proteins Key cellular processes Proteomes Polyketide synthesis Planctomycetota </ Elusimicrobiota </ Ubiquitin ligases Potential impact Overlooked aspect Neglected giants Majority found Huge proteins Host attachment Homologous sequences Highest propensity Higher tendency Functions related Functional groups Findings underscore Examining uniprotkb Ecological roles Cytoskeleton organization Average eukaryote |
| Summary: | (A) Whole distribution for all proteins in Uniprot (Release 2023_01). (B) Inset of the Distribution, for protein lengths bigger than 5000 amino acids, by superkingdom. Relevant proteins are highlighted. (C) Plot of the relationship between the size of the proteome (number of proteins), at log scale, and the number of huge proteins. (D) Box plot showing the likelihood of a proteome to contain huge proteins, per phylum, in percentage (number of huge proteins divided by proteome size). Each dot is a single proteome. All plots but A are colored blue, red and green for archaea, bacteria and eukaryota, respectively. |
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