Splicing Dysregulation of Non-Canonical GC-5′ Splice Sites of Breast Cancer Susceptibility Genes ATM and PALB2

[Background/Objectives]: The non-canonical GC-5′ splice sites (5′ss) are the most common exception (~1%) to the classical GT/AG splicing rule. They constitute weak 5′ss and can be regulated by splicing factors, so they are especially sensitive to genetic variations inducing the misrecognition of the...

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Detalles Bibliográficos
Autores: Llinares-Burguet, Inés, Sanoguera-Miralles, Lara, Valenzuela-Palomo, Alberto, García-Álvarez, Alicia, Bueno-Martínez, Elena, Velasco, Eladio
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2024
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/380373
Acceso en línea:http://hdl.handle.net/10261/380373
Access Level:acceso abierto
Palabra clave:Hereditary breast/ovarian cancer
ATM
PALB2
BRIP1
VUS
Splicing
Non-canonical splice sites
Aberrant splicing
Minigenes
Variant classification
Descripción
Sumario:[Background/Objectives]: The non-canonical GC-5′ splice sites (5′ss) are the most common exception (~1%) to the classical GT/AG splicing rule. They constitute weak 5′ss and can be regulated by splicing factors, so they are especially sensitive to genetic variations inducing the misrecognition of their respective exons. We aimed to investigate the GC-5′ss of the breast/ovarian cancer susceptibility genes, ATM (exon 50), BRIP1 (exon 1), and PALB2 (exon 12), and their dysregulation induced by DNA variants.