Comparative transcriptomics of the strain pairs AIEC/non-AIEC
<p>Dataset of comparative transcriptomics between Adherent Invasive Escherichia coli (AIEC)/non-Adherent Invasive Escherichia coli (non-AIEC) strain pairs.</p> <p>The dataset contains six files: four of them contain the comparisons made between pairs of AIEC and non-AIEC strains. I...
| Autores: | , , , |
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| Tipo de recurso: | conjunto de datos |
| Fecha de publicación: | 2023 |
| País: | España |
| Institución: | Consorci de Serveis Universitaris de Catalunya (CSUC) |
| Repositorio: | CORA.Repositori de Dades de Recerca |
| OAI Identifier: | oai:dnet:cora.rdr____::c9a5a066e4bf66c0c6eaf835b6d477c5 |
| Acceso en línea: | https://doi.org/10.34810/DATA699 |
| Access Level: | acceso abierto |
| Palabra clave: | Medicine, Health and Life Sciences Transcriptomes Transcriptome Expressió gènica Gene expression Genòmica comparativa Comparative genomics Escheríchia coli Escherichia coli |
| Sumario: | <p>Dataset of comparative transcriptomics between Adherent Invasive Escherichia coli (AIEC)/non-Adherent Invasive Escherichia coli (non-AIEC) strain pairs.</p> <p>The dataset contains six files: four of them contain the comparisons made between pairs of AIEC and non-AIEC strains. In addition, there are two additional files comparing comparisons made with the same pairs of strains but different conditions.</p> <p>In these files, you can find the gene expression values in each sample analyzed. Moreover, the log2 fold change, p-value, q-value and test_stat are displayed for each comparison. The four comparisons performed are:</p> <p>- Comparison 1 corresponds to comparative transcriptomics between AIEC17 vs ECG28 strains of the supernatant fraction of the infected cell culture.</p> <p>- Comparison 2 corresponds to comparative transcriptomics between AIEC17 vs ECG28 strains of the eukaryotic fraction, containing bacteria adhered and invading intestinal epithelial cells.</p> <p>- Comparison 5 corresponds to comparative transcriptomics between AIEC07 vs ECG04 strains of the supernatant fraction of the infected cell culture.</p> <p>- Comparison 6 corresponds to comparative transcriptomics between AIEC07 vs ECG04 strains of the eukaryotic fraction, containing bacteria adhered and invading intestinal epithelial cells.</p> <p>In each file, statistically significant differences of gene expression are selected and displayed in another sheet.</p> |
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