Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain

This article belongs to the Section Animal Viruses.

Detalles Bibliográficos
Autores: Buigues, Jaime, Viñals, Adrià, Martínez-Recio, Raquel, Monrós, Juan S., Sanjuán, Rafael, Cuevas, José M.
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2024
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/383836
Acceso en línea:http://hdl.handle.net/10261/383836
Access Level:acceso abierto
Palabra clave:DNA viruses
Metagenomics
Viral emergence
Viromics
Zoonotic viruses
id ES_595cb2ae2e294eea11fdf95cdfa25eb2
oai_identifier_str oai:digital.csic.es:10261/383836
network_acronym_str ES
network_name_str España
repository_id_str
spelling Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in SpainBuigues, JaimeViñals, AdriàMartínez-Recio, RaquelMonrós, Juan S.Sanjuán, RafaelCuevas, José M.DNA virusesMetagenomicsViral emergenceViromicsZoonotic virusesThis article belongs to the Section Animal Viruses.Viromics studies are allowing us to understand not only the enormous diversity of the virosphere, but also the potential threat posed by the emerging viruses. Regarding the latter, the main concern lies in monitoring the presence of RNA viruses, but the zoonotic potential of some DNA viruses, on which we have focused in the present study, should also be highlighted. For this purpose, we analyzed 160 fecal samples from 14 species of small terrestrial mammals, 9 of them belonging to the order Rodentia. This allowed us to identify a total of 25 complete or near-complete genomes belonging to the families Papillomaviridae, Polyomaviridae, Adenoviridae, Circoviridae, and Genomoviridae, 18 of which could be considered new species or types. Our results provide a significant increase in the number of complete genomes of DNA viruses of European origin with zoonotic potential in databases, which are at present under-represented compared to RNA viruses. In addition, the characterization of whole genomes is of relevance for the further study of the evolutionary forces governing virus adaptation, such as recombination, which may play an important role in cross-species transmission.This research was funded by grant PID2020-118602RB-I00 from the Spanish Ministerio de Ciencia e Innovación (MICINN) and co-financed by FEDER funds, and grant CIAICO/2022/110 from the Conselleria de Educación, Universidades y Empleo (Generalitat Valenciana).Peer reviewedMultidisciplinary Digital Publishing InstituteAgencia Estatal de Investigación (España)Ministerio de Ciencia, Innovación y Universidades (España)European CommissionGeneralitat ValencianaConsejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202520252024info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionapplication/pdfhttp://hdl.handle.net/10261/383836reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Inglés#PLACEHOLDER_PARENT_METADATA_VALUE#info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-118602RB-I00Buigues, Jaime; Viñals, Adrià; Martínez-Recio, Raquel; Monrós, Juan S.; Sanjuán, Rafael; Cuevas, José M.; 2024; Supplementary Materials: Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain [Dataset]; Multidisciplinary Digital Publishing Institute; https://doi.org/10.3390/v16121885https://doi.org/10.3390/v16121885Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/3838362026-05-22T06:33:51Z
dc.title.none.fl_str_mv Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
title Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
spellingShingle Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
Buigues, Jaime
DNA viruses
Metagenomics
Viral emergence
Viromics
Zoonotic viruses
title_short Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
title_full Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
title_fullStr Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
title_full_unstemmed Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
title_sort Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain
dc.creator.none.fl_str_mv Buigues, Jaime
Viñals, Adrià
Martínez-Recio, Raquel
Monrós, Juan S.
Sanjuán, Rafael
Cuevas, José M.
author Buigues, Jaime
author_facet Buigues, Jaime
Viñals, Adrià
Martínez-Recio, Raquel
Monrós, Juan S.
Sanjuán, Rafael
Cuevas, José M.
author_role author
author2 Viñals, Adrià
Martínez-Recio, Raquel
Monrós, Juan S.
Sanjuán, Rafael
Cuevas, José M.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Agencia Estatal de Investigación (España)
Ministerio de Ciencia, Innovación y Universidades (España)
European Commission
Generalitat Valenciana
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv DNA viruses
Metagenomics
Viral emergence
Viromics
Zoonotic viruses
topic DNA viruses
Metagenomics
Viral emergence
Viromics
Zoonotic viruses
description This article belongs to the Section Animal Viruses.
publishDate 2024
dc.date.none.fl_str_mv 2024
2025
2025
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/383836
url http://hdl.handle.net/10261/383836
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv #PLACEHOLDER_PARENT_METADATA_VALUE#
info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-118602RB-I00
Buigues, Jaime; Viñals, Adrià; Martínez-Recio, Raquel; Monrós, Juan S.; Sanjuán, Rafael; Cuevas, José M.; 2024; Supplementary Materials: Complete genomes of DNA viruses in fecal samples from small terrestrial mammals in Spain [Dataset]; Multidisciplinary Digital Publishing Institute; https://doi.org/10.3390/v16121885
https://doi.org/10.3390/v16121885
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
publisher.none.fl_str_mv Multidisciplinary Digital Publishing Institute
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1869408608674906112
score 15,812429

Similares en LA Referencia