PyAMPA

This paper introduces PyAMPA, a new bioinformatics platform designed for the discovery and optimization of antimicrobial peptides (AMPs). It addresses the urgent need for new antimicrobials due to the rise of antibiotic-resistant infections. PyAMPA, with its five predictive modules -AMPScreen, AMPVa...

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Detalles Bibliográficos
Autores: Ramos-Llorens, Marc|||0000-0002-5194-1279, Bello Madruga, Roberto|||0009-0003-8474-3951, Valle García, Javier|||0000-0002-6787-8286, Andreu Martínez, David|||0000-0002-6317-6666, Torrent, Marc|||0000-0001-6567-3474
Tipo de recurso: artículo
Fecha de publicación:2024
País:España
Institución:Universitat Autònoma de Barcelona
Repositorio:Dipòsit Digital de Documents de la UAB
Idioma:inglés
OAI Identifier:oai:ddd.uab.cat:306054
Acceso en línea:https://ddd.uab.cat/record/306054
https://dx.doi.org/urn:doi:10.1128/msystems.01358-23
Access Level:acceso abierto
Palabra clave:Antimicrobial peptide
Descripción
Sumario:This paper introduces PyAMPA, a new bioinformatics platform designed for the discovery and optimization of antimicrobial peptides (AMPs). It addresses the urgent need for new antimicrobials due to the rise of antibiotic-resistant infections. PyAMPA, with its five predictive modules -AMPScreen, AMPValidate, AMPSolve, AMPMutate and AMPOptimize, enables high-throughput screening of proteomes to identify potential AMP motifs and optimize them for clinical use. Its unique approach, combining prediction, design, and optimization tools, makes PyAMPA a robust solution for developing new AMP-based therapies, offering a significant advance in combatting antibiotic resistance.