Recombination rates according to Fiston-Lavier et al. 2010 and Comeron et al. 2012 for D. melanogaster genome release 6
This file contains genomic coordinates and its recombination rate as determined by the recombination rate calculator (RRC) (Fiston-Lavier et al. 2010) and (Comeron et al. 2012) (http://petrov.stanford.edu/cgi-bin/recombination-rates_updateR5.pl). Such coordinates were originally calculated based on...
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| Tipo de documento: | conjunto de datos |
| Data de publicação: | 2021 |
| País: | España |
| Recursos: | Consejo Superior de Investigaciones Científicas (CSIC) |
| Repositório: | DIGITAL.CSIC. Repositorio Institucional del CSIC |
| OAI Identifier: | oai:digital.csic.es:10261/231582 |
| Acesso em linha: | http://hdl.handle.net/10261/231582 |
| Access Level: | Acceso aberto |
| Palavra-chave: | Drosophila melanogaster Recombination rate Comeron Fiston-Lavier Transposable Elements Drosophila Melanogaster Rech 2021 |
| Resumo: | This file contains genomic coordinates and its recombination rate as determined by the recombination rate calculator (RRC) (Fiston-Lavier et al. 2010) and (Comeron et al. 2012) (http://petrov.stanford.edu/cgi-bin/recombination-rates_updateR5.pl). Such coordinates were originally calculated based on release 5 of D. melanogaster genome so we converted them to release 6 coordinates using the coord_converter.pl script from FlyBase (Gramates et al. 2017). We considered a region to have high recombination rates (HRR) when both recombination estimates were greater than 0. |
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