A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.

Identifying the underlying genetic drivers of the heritability of breast cancer prognosis remains elusive. We adapt a network-based approach to handle underpowered complex datasets to provide new insights into the potential function of germline variants in breast cancer prognosis. This network-based...

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Detalhes bibliográficos
Autores: Escala-Garcia, Maria, Abraham, Jean, Andrulis, Irene L, Anton-Culver, Hoda, Arndt, Volker, Ashworth, Alan, Auer, Paul L, Auvinen, Päivi, Beckmann, Matthias W, Beesley, Jonathan, Behrens, Sabine, Benitez, Javier, Bermisheva, Marina, Blomqvist, Carl, Blot, William, Bogdanova, Natalia V, Bojesen, Stig E, Bolla, Manjeet K, Børresen-Dale, Anne-Lise, Brauch, Hiltrud, Brenner, Hermann, Brucker, Sara Y, Burwinkel, Barbara, Caldas, Carlos, Canzian, Federico, Chang-Claude, Jenny, Chanock, Stephen J, Chin, Suet-Feung, Clarke, Christine L, Couch, Fergus J, Cox, Angela, Cross, Simon S, Czene, Kamila, Daly, Mary B, Dennis, Joe, Devilee, Peter, Dunn, Janet A, Dunning, Alison M, Dwek, Miriam, Earl, Helena M, Eccles, Diana M, Eliassen, A Heather, Ellberg, Carolina, Evans, D Gareth, Fasching, Peter A, Figueroa, Jonine, Flyger, Henrik, Gago-Dominguez, Manuela, Gapstur, Susan M, García-Closas, Montserrat, García-Sáenz, José A, Gaudet, Mia M, George, Angela, Giles, Graham G, Goldgar, David E, González-Neira, Anna, Grip, Mervi, Guénel, Pascal, Guo, Qi, Haiman, Christopher A, Håkansson, Niclas, Hamann, Ute, Harrington, Patricia A, Hiller, Louise, Hooning, Maartje J, Hopper, John L, Howell, Anthony, Huang, Chiun-Sheng, Huang, Guanmengqian, Hunter, David J, Jakubowska, Anna, John, Esther M, Kaaks, Rudolf, Kapoor, Pooja Middha, Keeman, Renske, Kitahara, Cari M, Kraft, Peter, Lambrechts, Diether, Le Marchand, Loic, Lejbkowicz, Flavio, Lindblom, Annika, Lubiński, Jan, Mannermaa, Arto, Manoochehri, Mehdi, Manoukian, Siranoush, Margolin, Sara, Martinez, Maria Elena, Maurer, Tabea, Mavroudis, Dimitrios, Meindl, Alfons, Milne, Roger L, Mulligan, Anna Marie, Neuhausen, Susan L, Nevanlinna, Heli, Newman, William G, Olshan, Andrew F, Olson, Janet E, Olsson, Håkan, Orr, Nick, Peterlongo, Paolo, Petridis, Christos, Prentice, Ross L, Presneau, Nadege, Punie, Kevin, Ramachandran, Dhanya, Rennert, Gad, Romero, Atocha, Sachchithananthan, Mythily, Saloustros, Emmanouil, Sawyer, Elinor J, Schmutzler, Rita K, Schwentner, Lukas, Scott, Christopher, Simard, Jacques, Sohn, Christof, Southey, Melissa C, Swerdlow, Anthony J, Tamimi, Rulla M, Tapper, William J, Teixeira, Manuel R, Terry, Mary Beth, Thorne, Heather, Tollenaar, Rob A E M, Tomlinson, Ian, Troester, Melissa A, Truong, Thérèse, Turnbull, Clare, Vachon, Celine M, van der Kolk, Lizet E, Wang, Qin, Winqvist, Robert, Wolk, Alicja, Yang, Xiaohong R, Ziogas, Argyrios, Pharoah, Paul D P, Hall, Per, Wessels, Lodewyk F A, Chenevix-Trench, Georgia, Bader, Gary D, Dörk, Thilo, Easton, Douglas F, Canisius, Sander, Schmidt, Marjanka K, Gonzalez Neira, Anna, Andrulis, Irene L., Auer, Paul L., Beckmann, Matthias W., Bogdanova, Natalia V., Bojesen, Stig E., Bolla, Manjeet K., Brucker, Sara Y., Chanock, Stephen J., Clarke, Christine L., Couch, Fergus J., Cross, Simon S., Daly, Mary B., Dunn, Janet A., Dunning, Alison M., Earl, Helena M., Eccles, Diana M., Eliassen, A. Heather, Evans, D. Gareth, Fasching, Peter A., Gapstur, Susan M., García-Sáenz, José A., Gaudet, Mia M., Giles, Graham G., Goldgar, David E., Haiman, Christopher A., Harrington, Patricia A., Hooning, Maartje J., Hopper, John L., Hunter, David J., John, Esther M., Kitahara, Cari M., Koppert, Linetta B, Kristensen, Vessela N, Milne, Roger L., Neuhausen, Susan L., Newman, William G., Olshan, Andrew F., Olson, Janet E., Prentice, Ross L., Sawyer, Elinor J., Schmutzler, Rita K., Southey, Melissa C., Swerdlow, Anthony J., Tamimi, Rulla M., Tapper, William J., Tollenaar, Rob A. E. M., Troester, Melissa A., Vachon, Celine M., van der Kolk, Lizet E., Yang, Xiaohong R., Pharoah, Paul D. P., Wessels, Lodewyk F. A., Bader, Gary D., Easton, Douglas F., Schmidt, Marjanka K.
Formato: artículo
Fecha de publicación:2020
País:España
Recursos:Instituto de Salud Carlos III (ISCIII)
Repositorio:Repisalud
Idioma:inglés
OAI Identifier:oai:repisalud.isciii.es:20.500.12105/12181
Acesso em linha:http://hdl.handle.net/20.500.12105/12181
Access Level:acceso abierto
Palavra-chave:Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
id ES_4e90fa852f8244b157b13a8ffbbcf0ae
oai_identifier_str oai:repisalud.isciii.es:20.500.12105/12181
network_acronym_str ES
network_name_str España
repository_id_str
dc.title.none.fl_str_mv A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
spellingShingle A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
Escala-Garcia, Maria
Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
title_short A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_full A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_fullStr A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_full_unstemmed A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
title_sort A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.
dc.creator.none.fl_str_mv Escala-Garcia, Maria
Abraham, Jean
Andrulis, Irene L
Anton-Culver, Hoda
Arndt, Volker
Ashworth, Alan
Auer, Paul L
Auvinen, Päivi
Beckmann, Matthias W
Beesley, Jonathan
Behrens, Sabine
Benitez, Javier
Bermisheva, Marina
Blomqvist, Carl
Blot, William
Bogdanova, Natalia V
Bojesen, Stig E
Bolla, Manjeet K
Børresen-Dale, Anne-Lise
Brauch, Hiltrud
Brenner, Hermann
Brucker, Sara Y
Burwinkel, Barbara
Caldas, Carlos
Canzian, Federico
Chang-Claude, Jenny
Chanock, Stephen J
Chin, Suet-Feung
Clarke, Christine L
Couch, Fergus J
Cox, Angela
Cross, Simon S
Czene, Kamila
Daly, Mary B
Dennis, Joe
Devilee, Peter
Dunn, Janet A
Dunning, Alison M
Dwek, Miriam
Earl, Helena M
Eccles, Diana M
Eliassen, A Heather
Ellberg, Carolina
Evans, D Gareth
Fasching, Peter A
Figueroa, Jonine
Flyger, Henrik
Gago-Dominguez, Manuela
Gapstur, Susan M
García-Closas, Montserrat
García-Sáenz, José A
Gaudet, Mia M
George, Angela
Giles, Graham G
Goldgar, David E
González-Neira, Anna
Grip, Mervi
Guénel, Pascal
Guo, Qi
Haiman, Christopher A
Håkansson, Niclas
Hamann, Ute
Harrington, Patricia A
Hiller, Louise
Hooning, Maartje J
Hopper, John L
Howell, Anthony
Huang, Chiun-Sheng
Huang, Guanmengqian
Hunter, David J
Jakubowska, Anna
John, Esther M
Kaaks, Rudolf
Kapoor, Pooja Middha
Keeman, Renske
Kitahara, Cari M
Kraft, Peter
Lambrechts, Diether
Le Marchand, Loic
Lejbkowicz, Flavio
Lindblom, Annika
Lubiński, Jan
Mannermaa, Arto
Manoochehri, Mehdi
Manoukian, Siranoush
Margolin, Sara
Martinez, Maria Elena
Maurer, Tabea
Mavroudis, Dimitrios
Meindl, Alfons
Milne, Roger L
Mulligan, Anna Marie
Neuhausen, Susan L
Nevanlinna, Heli
Newman, William G
Olshan, Andrew F
Olson, Janet E
Olsson, Håkan
Orr, Nick
Peterlongo, Paolo
Petridis, Christos
Prentice, Ross L
Presneau, Nadege
Punie, Kevin
Ramachandran, Dhanya
Rennert, Gad
Romero, Atocha
Sachchithananthan, Mythily
Saloustros, Emmanouil
Sawyer, Elinor J
Schmutzler, Rita K
Schwentner, Lukas
Scott, Christopher
Simard, Jacques
Sohn, Christof
Southey, Melissa C
Swerdlow, Anthony J
Tamimi, Rulla M
Tapper, William J
Teixeira, Manuel R
Terry, Mary Beth
Thorne, Heather
Tollenaar, Rob A E M
Tomlinson, Ian
Troester, Melissa A
Truong, Thérèse
Turnbull, Clare
Vachon, Celine M
van der Kolk, Lizet E
Wang, Qin
Winqvist, Robert
Wolk, Alicja
Yang, Xiaohong R
Ziogas, Argyrios
Pharoah, Paul D P
Hall, Per
Wessels, Lodewyk F A
Chenevix-Trench, Georgia
Bader, Gary D
Dörk, Thilo
Easton, Douglas F
Canisius, Sander
Schmidt, Marjanka K
Gonzalez Neira, Anna
Andrulis, Irene L.
Auer, Paul L.
Beckmann, Matthias W.
Bogdanova, Natalia V.
Bojesen, Stig E.
Bolla, Manjeet K.
Brucker, Sara Y.
Chanock, Stephen J.
Clarke, Christine L.
Couch, Fergus J.
Cross, Simon S.
Daly, Mary B.
Dunn, Janet A.
Dunning, Alison M.
Earl, Helena M.
Eccles, Diana M.
Eliassen, A. Heather
Evans, D. Gareth
Fasching, Peter A.
Gapstur, Susan M.
García-Sáenz, José A.
Gaudet, Mia M.
Giles, Graham G.
Goldgar, David E.
Haiman, Christopher A.
Harrington, Patricia A.
Hooning, Maartje J.
Hopper, John L.
Hunter, David J.
John, Esther M.
Kitahara, Cari M.
Koppert, Linetta B
Kristensen, Vessela N
Milne, Roger L.
Neuhausen, Susan L.
Newman, William G.
Olshan, Andrew F.
Olson, Janet E.
Prentice, Ross L.
Sawyer, Elinor J.
Schmutzler, Rita K.
Southey, Melissa C.
Swerdlow, Anthony J.
Tamimi, Rulla M.
Tapper, William J.
Tollenaar, Rob A. E. M.
Troester, Melissa A.
Vachon, Celine M.
van der Kolk, Lizet E.
Yang, Xiaohong R.
Pharoah, Paul D. P.
Wessels, Lodewyk F. A.
Bader, Gary D.
Easton, Douglas F.
Schmidt, Marjanka K.
author Escala-Garcia, Maria
author_facet Escala-Garcia, Maria
Abraham, Jean
Andrulis, Irene L
Anton-Culver, Hoda
Arndt, Volker
Ashworth, Alan
Auer, Paul L
Auvinen, Päivi
Beckmann, Matthias W
Beesley, Jonathan
Behrens, Sabine
Benitez, Javier
Bermisheva, Marina
Blomqvist, Carl
Blot, William
Bogdanova, Natalia V
Bojesen, Stig E
Bolla, Manjeet K
Børresen-Dale, Anne-Lise
Brauch, Hiltrud
Brenner, Hermann
Brucker, Sara Y
Burwinkel, Barbara
Caldas, Carlos
Canzian, Federico
Chang-Claude, Jenny
Chanock, Stephen J
Chin, Suet-Feung
Clarke, Christine L
Couch, Fergus J
Cox, Angela
Cross, Simon S
Czene, Kamila
Daly, Mary B
Dennis, Joe
Devilee, Peter
Dunn, Janet A
Dunning, Alison M
Dwek, Miriam
Earl, Helena M
Eccles, Diana M
Eliassen, A Heather
Ellberg, Carolina
Evans, D Gareth
Fasching, Peter A
Figueroa, Jonine
Flyger, Henrik
Gago-Dominguez, Manuela
Gapstur, Susan M
García-Closas, Montserrat
García-Sáenz, José A
Gaudet, Mia M
George, Angela
Giles, Graham G
Goldgar, David E
González-Neira, Anna
Grip, Mervi
Guénel, Pascal
Guo, Qi
Haiman, Christopher A
Håkansson, Niclas
Hamann, Ute
Harrington, Patricia A
Hiller, Louise
Hooning, Maartje J
Hopper, John L
Howell, Anthony
Huang, Chiun-Sheng
Huang, Guanmengqian
Hunter, David J
Jakubowska, Anna
John, Esther M
Kaaks, Rudolf
Kapoor, Pooja Middha
Keeman, Renske
Kitahara, Cari M
Kraft, Peter
Lambrechts, Diether
Le Marchand, Loic
Lejbkowicz, Flavio
Lindblom, Annika
Lubiński, Jan
Mannermaa, Arto
Manoochehri, Mehdi
Manoukian, Siranoush
Margolin, Sara
Martinez, Maria Elena
Maurer, Tabea
Mavroudis, Dimitrios
Meindl, Alfons
Milne, Roger L
Mulligan, Anna Marie
Neuhausen, Susan L
Nevanlinna, Heli
Newman, William G
Olshan, Andrew F
Olson, Janet E
Olsson, Håkan
Orr, Nick
Peterlongo, Paolo
Petridis, Christos
Prentice, Ross L
Presneau, Nadege
Punie, Kevin
Ramachandran, Dhanya
Rennert, Gad
Romero, Atocha
Sachchithananthan, Mythily
Saloustros, Emmanouil
Sawyer, Elinor J
Schmutzler, Rita K
Schwentner, Lukas
Scott, Christopher
Simard, Jacques
Sohn, Christof
Southey, Melissa C
Swerdlow, Anthony J
Tamimi, Rulla M
Tapper, William J
Teixeira, Manuel R
Terry, Mary Beth
Thorne, Heather
Tollenaar, Rob A E M
Tomlinson, Ian
Troester, Melissa A
Truong, Thérèse
Turnbull, Clare
Vachon, Celine M
van der Kolk, Lizet E
Wang, Qin
Winqvist, Robert
Wolk, Alicja
Yang, Xiaohong R
Ziogas, Argyrios
Pharoah, Paul D P
Hall, Per
Wessels, Lodewyk F A
Chenevix-Trench, Georgia
Bader, Gary D
Dörk, Thilo
Easton, Douglas F
Canisius, Sander
Schmidt, Marjanka K
Gonzalez Neira, Anna
Andrulis, Irene L.
Auer, Paul L.
Beckmann, Matthias W.
Bogdanova, Natalia V.
Bojesen, Stig E.
Bolla, Manjeet K.
Brucker, Sara Y.
Chanock, Stephen J.
Clarke, Christine L.
Couch, Fergus J.
Cross, Simon S.
Daly, Mary B.
Dunn, Janet A.
Dunning, Alison M.
Earl, Helena M.
Eccles, Diana M.
Eliassen, A. Heather
Evans, D. Gareth
Fasching, Peter A.
Gapstur, Susan M.
García-Sáenz, José A.
Gaudet, Mia M.
Giles, Graham G.
Goldgar, David E.
Haiman, Christopher A.
Harrington, Patricia A.
Hooning, Maartje J.
Hopper, John L.
Hunter, David J.
John, Esther M.
Kitahara, Cari M.
Koppert, Linetta B
Kristensen, Vessela N
Milne, Roger L.
Neuhausen, Susan L.
Newman, William G.
Olshan, Andrew F.
Olson, Janet E.
Prentice, Ross L.
Sawyer, Elinor J.
Schmutzler, Rita K.
Southey, Melissa C.
Swerdlow, Anthony J.
Tamimi, Rulla M.
Tapper, William J.
Tollenaar, Rob A. E. M.
Troester, Melissa A.
Vachon, Celine M.
van der Kolk, Lizet E.
Yang, Xiaohong R.
Pharoah, Paul D. P.
Wessels, Lodewyk F. A.
Bader, Gary D.
Easton, Douglas F.
Schmidt, Marjanka K.
author_role author
author2 Abraham, Jean
Andrulis, Irene L
Anton-Culver, Hoda
Arndt, Volker
Ashworth, Alan
Auer, Paul L
Auvinen, Päivi
Beckmann, Matthias W
Beesley, Jonathan
Behrens, Sabine
Benitez, Javier
Bermisheva, Marina
Blomqvist, Carl
Blot, William
Bogdanova, Natalia V
Bojesen, Stig E
Bolla, Manjeet K
Børresen-Dale, Anne-Lise
Brauch, Hiltrud
Brenner, Hermann
Brucker, Sara Y
Burwinkel, Barbara
Caldas, Carlos
Canzian, Federico
Chang-Claude, Jenny
Chanock, Stephen J
Chin, Suet-Feung
Clarke, Christine L
Couch, Fergus J
Cox, Angela
Cross, Simon S
Czene, Kamila
Daly, Mary B
Dennis, Joe
Devilee, Peter
Dunn, Janet A
Dunning, Alison M
Dwek, Miriam
Earl, Helena M
Eccles, Diana M
Eliassen, A Heather
Ellberg, Carolina
Evans, D Gareth
Fasching, Peter A
Figueroa, Jonine
Flyger, Henrik
Gago-Dominguez, Manuela
Gapstur, Susan M
García-Closas, Montserrat
García-Sáenz, José A
Gaudet, Mia M
George, Angela
Giles, Graham G
Goldgar, David E
González-Neira, Anna
Grip, Mervi
Guénel, Pascal
Guo, Qi
Haiman, Christopher A
Håkansson, Niclas
Hamann, Ute
Harrington, Patricia A
Hiller, Louise
Hooning, Maartje J
Hopper, John L
Howell, Anthony
Huang, Chiun-Sheng
Huang, Guanmengqian
Hunter, David J
Jakubowska, Anna
John, Esther M
Kaaks, Rudolf
Kapoor, Pooja Middha
Keeman, Renske
Kitahara, Cari M
Kraft, Peter
Lambrechts, Diether
Le Marchand, Loic
Lejbkowicz, Flavio
Lindblom, Annika
Lubiński, Jan
Mannermaa, Arto
Manoochehri, Mehdi
Manoukian, Siranoush
Margolin, Sara
Martinez, Maria Elena
Maurer, Tabea
Mavroudis, Dimitrios
Meindl, Alfons
Milne, Roger L
Mulligan, Anna Marie
Neuhausen, Susan L
Nevanlinna, Heli
Newman, William G
Olshan, Andrew F
Olson, Janet E
Olsson, Håkan
Orr, Nick
Peterlongo, Paolo
Petridis, Christos
Prentice, Ross L
Presneau, Nadege
Punie, Kevin
Ramachandran, Dhanya
Rennert, Gad
Romero, Atocha
Sachchithananthan, Mythily
Saloustros, Emmanouil
Sawyer, Elinor J
Schmutzler, Rita K
Schwentner, Lukas
Scott, Christopher
Simard, Jacques
Sohn, Christof
Southey, Melissa C
Swerdlow, Anthony J
Tamimi, Rulla M
Tapper, William J
Teixeira, Manuel R
Terry, Mary Beth
Thorne, Heather
Tollenaar, Rob A E M
Tomlinson, Ian
Troester, Melissa A
Truong, Thérèse
Turnbull, Clare
Vachon, Celine M
van der Kolk, Lizet E
Wang, Qin
Winqvist, Robert
Wolk, Alicja
Yang, Xiaohong R
Ziogas, Argyrios
Pharoah, Paul D P
Hall, Per
Wessels, Lodewyk F A
Chenevix-Trench, Georgia
Bader, Gary D
Dörk, Thilo
Easton, Douglas F
Canisius, Sander
Schmidt, Marjanka K
Gonzalez Neira, Anna
Andrulis, Irene L.
Auer, Paul L.
Beckmann, Matthias W.
Bogdanova, Natalia V.
Bojesen, Stig E.
Bolla, Manjeet K.
Brucker, Sara Y.
Chanock, Stephen J.
Clarke, Christine L.
Couch, Fergus J.
Cross, Simon S.
Daly, Mary B.
Dunn, Janet A.
Dunning, Alison M.
Earl, Helena M.
Eccles, Diana M.
Eliassen, A. Heather
Evans, D. Gareth
Fasching, Peter A.
Gapstur, Susan M.
García-Sáenz, José A.
Gaudet, Mia M.
Giles, Graham G.
Goldgar, David E.
Haiman, Christopher A.
Harrington, Patricia A.
Hooning, Maartje J.
Hopper, John L.
Hunter, David J.
John, Esther M.
Kitahara, Cari M.
Koppert, Linetta B
Kristensen, Vessela N
Milne, Roger L.
Neuhausen, Susan L.
Newman, William G.
Olshan, Andrew F.
Olson, Janet E.
Prentice, Ross L.
Sawyer, Elinor J.
Schmutzler, Rita K.
Southey, Melissa C.
Swerdlow, Anthony J.
Tamimi, Rulla M.
Tapper, William J.
Tollenaar, Rob A. E. M.
Troester, Melissa A.
Vachon, Celine M.
van der Kolk, Lizet E.
Yang, Xiaohong R.
Pharoah, Paul D. P.
Wessels, Lodewyk F. A.
Bader, Gary D.
Easton, Douglas F.
Schmidt, Marjanka K.
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dc.contributor.none.fl_str_mv National Institute for Health Research (Reino Unido)
German Cancer Research Center
United States Department of Health and Human Services
Cancer Research UK (Reino Unido)
Unión Europea. Comisión Europea
Canadian Institutes of Health Research
Ministere de l'Economie, Science et Innovation du Quebec (Canadá)
Dutch Cancer Society (Holanda)
Instituto de Salud Carlos III
Asociación Española Contra el Cáncer
Deutsche Krebshilfe
Russian Foundation for Basic Research
Swedish Research Council
Breast Cancer Now (Reino Unido)

dc.subject.none.fl_str_mv Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
topic Genetic Variation
Genome-Wide Association Study
Germ Cells
Apoptosis
Breast Neoplasms
Circadian Clocks
Computational Biology
Female
GTP-Binding Protein alpha Subunits
GTP-Binding Protein alpha Subunits, Gq-G11
Gene Regulatory Networks
Genotype
Humans
Prognosis
Receptors, Estrogen
Signal Transduction
description Identifying the underlying genetic drivers of the heritability of breast cancer prognosis remains elusive. We adapt a network-based approach to handle underpowered complex datasets to provide new insights into the potential function of germline variants in breast cancer prognosis. This network-based analysis studies ~7.3 million variants in 84,457 breast cancer patients in relation to breast cancer survival and confirms the results on 12,381 independent patients. Aggregating the prognostic effects of genetic variants across multiple genes, we identify four gene modules associated with survival in estrogen receptor (ER)-negative and one in ER-positive disease. The modules show biological enrichment for cancer-related processes such as G-alpha signaling, circadian clock, angiogenesis, and Rho-GTPases in apoptosis.
publishDate 2020
dc.date.none.fl_str_mv 2020
2020-11-01
2020
2020-11-01
2021
2021-03-10
dc.type.none.fl_str_mv journal article
http://purl.org/coar/resource_type/c_6501
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dc.identifier.none.fl_str_mv http://hdl.handle.net/20.500.12105/12181
url http://hdl.handle.net/20.500.12105/12181
dc.language.none.fl_str_mv Inglés
eng
language_invalid_str_mv Inglés
language eng
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ES RD06 0020
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dc.rights.none.fl_str_mv open access
http://purl.org/coar/access_right/c_abf2
Atribución-NoComercial-CompartirIgual 4.0 Internacional
http://creativecommons.org/licenses/by-nc-sa/4.0/
dc.rights.openaire.fl_str_mv info:eu-repo/semantics/openAccess
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Atribución-NoComercial-CompartirIgual 4.0 Internacional
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dc.publisher.none.fl_str_mv Nature Publishing Group
publisher.none.fl_str_mv Nature Publishing Group
dc.source.none.fl_str_mv reponame:Repisalud
instname:Instituto de Salud Carlos III (ISCIII)
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spelling A network analysis to identify mediators of germline-driven differences in breast cancer prognosis.Escala-Garcia, MariaAbraham, JeanAndrulis, Irene LAnton-Culver, HodaArndt, VolkerAshworth, AlanAuer, Paul LAuvinen, PäiviBeckmann, Matthias WBeesley, JonathanBehrens, SabineBenitez, JavierBermisheva, MarinaBlomqvist, CarlBlot, WilliamBogdanova, Natalia VBojesen, Stig EBolla, Manjeet KBørresen-Dale, Anne-LiseBrauch, HiltrudBrenner, HermannBrucker, Sara YBurwinkel, BarbaraCaldas, CarlosCanzian, FedericoChang-Claude, JennyChanock, Stephen JChin, Suet-FeungClarke, Christine LCouch, Fergus JCox, AngelaCross, Simon SCzene, KamilaDaly, Mary BDennis, JoeDevilee, PeterDunn, Janet ADunning, Alison MDwek, MiriamEarl, Helena MEccles, Diana MEliassen, A HeatherEllberg, CarolinaEvans, D GarethFasching, Peter AFigueroa, JonineFlyger, HenrikGago-Dominguez, ManuelaGapstur, Susan MGarcía-Closas, MontserratGarcía-Sáenz, José AGaudet, Mia MGeorge, AngelaGiles, Graham GGoldgar, David EGonzález-Neira, AnnaGrip, MerviGuénel, PascalGuo, QiHaiman, Christopher AHåkansson, NiclasHamann, UteHarrington, Patricia AHiller, LouiseHooning, Maartje JHopper, John LHowell, AnthonyHuang, Chiun-ShengHuang, GuanmengqianHunter, David JJakubowska, AnnaJohn, Esther MKaaks, RudolfKapoor, Pooja MiddhaKeeman, RenskeKitahara, Cari MKraft, PeterLambrechts, DietherLe Marchand, LoicLejbkowicz, FlavioLindblom, AnnikaLubiński, JanMannermaa, ArtoManoochehri, MehdiManoukian, SiranoushMargolin, SaraMartinez, Maria ElenaMaurer, TabeaMavroudis, DimitriosMeindl, AlfonsMilne, Roger LMulligan, Anna MarieNeuhausen, Susan LNevanlinna, HeliNewman, William GOlshan, Andrew FOlson, Janet EOlsson, HåkanOrr, NickPeterlongo, PaoloPetridis, ChristosPrentice, Ross LPresneau, NadegePunie, KevinRamachandran, DhanyaRennert, GadRomero, AtochaSachchithananthan, MythilySaloustros, EmmanouilSawyer, Elinor JSchmutzler, Rita KSchwentner, LukasScott, ChristopherSimard, JacquesSohn, ChristofSouthey, Melissa CSwerdlow, Anthony JTamimi, Rulla MTapper, William JTeixeira, Manuel RTerry, Mary BethThorne, HeatherTollenaar, Rob A E MTomlinson, IanTroester, Melissa ATruong, ThérèseTurnbull, ClareVachon, Celine Mvan der Kolk, Lizet EWang, QinWinqvist, RobertWolk, AlicjaYang, Xiaohong RZiogas, ArgyriosPharoah, Paul D PHall, PerWessels, Lodewyk F AChenevix-Trench, GeorgiaBader, Gary DDörk, ThiloEaston, Douglas FCanisius, SanderSchmidt, Marjanka KGonzalez Neira, AnnaAndrulis, Irene L.Auer, Paul L.Beckmann, Matthias W.Bogdanova, Natalia V.Bojesen, Stig E.Bolla, Manjeet K.Brucker, Sara Y.Chanock, Stephen J.Clarke, Christine L.Couch, Fergus J.Cross, Simon S.Daly, Mary B.Dunn, Janet A.Dunning, Alison M.Earl, Helena M.Eccles, Diana M.Eliassen, A. HeatherEvans, D. GarethFasching, Peter A.Gapstur, Susan M.García-Sáenz, José A.Gaudet, Mia M.Giles, Graham G.Goldgar, David E.Haiman, Christopher A.Harrington, Patricia A.Hooning, Maartje J.Hopper, John L.Hunter, David J.John, Esther M.Kitahara, Cari M.Koppert, Linetta BKristensen, Vessela NMilne, Roger L.Neuhausen, Susan L.Newman, William G.Olshan, Andrew F.Olson, Janet E.Prentice, Ross L.Sawyer, Elinor J.Schmutzler, Rita K.Southey, Melissa C.Swerdlow, Anthony J.Tamimi, Rulla M.Tapper, William J.Tollenaar, Rob A. E. M.Troester, Melissa A.Vachon, Celine M.van der Kolk, Lizet E.Yang, Xiaohong R.Pharoah, Paul D. P.Wessels, Lodewyk F. A.Bader, Gary D.Easton, Douglas F.Schmidt, Marjanka K.Genetic VariationGenome-Wide Association StudyGerm CellsApoptosisBreast NeoplasmsCircadian ClocksComputational BiologyFemaleGTP-Binding Protein alpha SubunitsGTP-Binding Protein alpha Subunits, Gq-G11Gene Regulatory NetworksGenotypeHumansPrognosisReceptors, EstrogenSignal TransductionIdentifying the underlying genetic drivers of the heritability of breast cancer prognosis remains elusive. We adapt a network-based approach to handle underpowered complex datasets to provide new insights into the potential function of germline variants in breast cancer prognosis. This network-based analysis studies ~7.3 million variants in 84,457 breast cancer patients in relation to breast cancer survival and confirms the results on 12,381 independent patients. Aggregating the prognostic effects of genetic variants across multiple genes, we identify four gene modules associated with survival in estrogen receptor (ER)-negative and one in ER-positive disease. The modules show biological enrichment for cancer-related processes such as G-alpha signaling, circadian clock, angiogenesis, and Rho-GTPases in apoptosis.Nature Publishing GroupNational Institute for Health Research (Reino Unido)German Cancer Research CenterUnited States Department of Health and Human ServicesCancer Research UK (Reino Unido)Unión Europea. Comisión EuropeaCanadian Institutes of Health ResearchMinistere de l'Economie, Science et Innovation du Quebec (Canadá)Dutch Cancer Society (Holanda)Instituto de Salud Carlos IIIAsociación Española Contra el CáncerDeutsche KrebshilfeRussian Foundation for Basic ResearchSwedish Research CouncilBreast Cancer Now (Reino Unido)20212021-03-1020202020-11-0120202020-11-01journal articlehttp://purl.org/coar/resource_type/c_6501VoRhttp://purl.org/coar/version/c_970fb48d4fbd8a85info:eu-repo/semantics/articleapplication/pdfapplication/pdfapplication/pdfapplication/pdfapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/vnd.openxmlformats-officedocument.spreadsheetml.sheetapplication/pdfhttp://hdl.handle.net/20.500.12105/12181reponame:Repisaludinstname:Instituto de Salud Carlos III (ISCIII)InglésengES PI11 00923ES PI12 00070ES RD06 0020ES PI13 00061ES PI13 01162ES PI13 01136ES FIS PI17 00918ES FIS PI12 02125open accesshttp://purl.org/coar/access_right/c_abf2Atribución-NoComercial-CompartirIgual 4.0 Internacionalhttp://creativecommons.org/licenses/by-nc-sa/4.0/info:eu-repo/semantics/openAccessoai:repisalud.isciii.es:20.500.12105/121812026-06-12T12:43:37Z
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