18S rDNA gene metabarcoding of microeukaryotes and epi-endophytes in the holobiome of seven species of large brown algae

20 pages, 6 figures, supporting Information https://doi.org/10.1111/jpy.13377.-- Data Availability Statement: The complete sequencing data set is available at the European Nucleotide Archive under the study accession number PRJEB45285 (http://www.ebi.ac.uk/ena/data/view/PRJEB45285). Amplicon V4 sequ...

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Detalles Bibliográficos
Autores: Bjorbækmo, Marit F.M., Brodie, Juliet, Krabberød, Anders K., Logares, Ramiro, Fuß, Janina, Fredriksen, Stein, Wold-Dobbe, Anders, Shalchian-Tabrizi, Kamran, Bass, David
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2023
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/337566
Acceso en línea:http://hdl.handle.net/10261/337566
Access Level:acceso abierto
Palabra clave:Endophyte
Epiphyte
Eukaryome
Fungi
Holobiont
Microeukaryote
Phaeophyceae
Protist
Seaweed
Symbiome
http://metadata.un.org/sdg/14
Conserve and sustainably use the oceans, seas and marine resources for sustainable development
Descripción
Sumario:20 pages, 6 figures, supporting Information https://doi.org/10.1111/jpy.13377.-- Data Availability Statement: The complete sequencing data set is available at the European Nucleotide Archive under the study accession number PRJEB45285 (http://www.ebi.ac.uk/ena/data/view/PRJEB45285). Amplicon V4 sequence data are in Samples ERS6495425-ERS6495434, full-length 18S clone sequences from the brown algal hosts are available at NCBI GenBank under the Accession numbers OQ883584–OQ883643. All used R packages as well as other software are cited in “Methods” section