Disentangling microbial networks across pelagic zones in the tropical and subtropical global ocean

17 pages, 6 figures, 2 tables, supplementary information https://doi.org/10.1038/s41467-023-44550-y.-- Data availability: DNA sequence data is publicly available at the European Nucleotide Archive (see details in Table 2). The accession numbers for the different datasets are: MalaSurf (PRJEB23913, P...

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Detalles Bibliográficos
Autores: Deutschmann, Ina, Delage, Erwan, Giner, Caterina R., Sebastián, Marta, Poulain, Julie, Arístegui, Javier, Duarte, Carlos M., Acinas, Silvia G., Massana, Ramon, Gasol, Josep M., Eveillard, Damien, Chaffron, Samuel, Logares, Ramiro
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2024
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/342922
Acceso en línea:http://hdl.handle.net/10261/342922
Access Level:acceso abierto
Palabra clave:http://metadata.un.org/sdg/14
Conserve and sustainably use the oceans, seas and marine resources for sustainable development
Descripción
Sumario:17 pages, 6 figures, 2 tables, supplementary information https://doi.org/10.1038/s41467-023-44550-y.-- Data availability: DNA sequence data is publicly available at the European Nucleotide Archive (see details in Table 2). The accession numbers for the different datasets are: MalaSurf (PRJEB23913, PRJEB25224), MalaVP (PRJEB23771, PRJEB45015), MalaDeep (PRJEB45011, PRJEB45014), Hotmix (PRJEB44683, PRJEB44474). OTU tables and source data to generate the figures and tables are provided in GitHub (https://github.com/InaMariaDeutschmann/GlobalNetworkMalaspinaHotmix) and Zenodo: https://doi.org/10.5281/zenodo.1023007337. The following databases have been used: SILVA v13289, PR2 v4.11.190, and the World Ocean Database 201391.-- Code availability: The code for data analysis, including commands to run FlashWeave and EnDED (environmentally-driven-edge-detection and computing Jaccard index), is publicly available at GitHub (https://github.com/InaMariaDeutschmann/GlobalNetworkMalaspinaHotmix) and Zenodo37