Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory
17 pages, 5 figures, 2 tables, supplementary information https://doi.org/10.1186/s40168-023-01571-5.-- Availability of data and materials: Raw data for “Jul17” incubation were already published at the NCBI BioSample database with accession number SAMN11783926 [38]. For the rest of the incubations, r...
| Autores: | , , , , , , , , |
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| Tipo de recurso: | artículo |
| Estado: | Versión publicada |
| Fecha de publicación: | 2023 |
| País: | España |
| Institución: | Consejo Superior de Investigaciones Científicas (CSIC) |
| Repositorio: | DIGITAL.CSIC. Repositorio Institucional del CSIC |
| OAI Identifier: | oai:digital.csic.es:10261/329476 |
| Acceso en línea: | http://hdl.handle.net/10261/329476 |
| Access Level: | acceso abierto |
| Palabra clave: | Bacterivory Heterotrophic flagellates Metatranscriptomics Functional genes Unamended incubations Phagocytosis Peptidases Glycosidases http://metadata.un.org/sdg/14 Conserve and sustainably use the oceans, seas and marine resources for sustainable development |
| Sumario: | 17 pages, 5 figures, 2 tables, supplementary information https://doi.org/10.1186/s40168-023-01571-5.-- Availability of data and materials: Raw data for “Jul17” incubation were already published at the NCBI BioSample database with accession number SAMN11783926 [38]. For the rest of the incubations, raw data are deposited at NCBI with accession number PRJNA973582. Assemblies, quantification, and functional annotation tables are available at FigShare (https://doi.org/10.6084/m9.figshare.22801697), and all code used for data processing and analyses is available at GitHub (https://github.com/aleixop/metaT_bacterivory) |
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