Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
Background: Comprehensive molecular studies on tumours are needed to delineate immortalization process steps and identify sensitive prognostic biomarkers in thyroid cancer. Methods and results: In this study, we extensively characterize telomere-related alterations in a series of 106 thyroid tumours...
| Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
|---|---|
| Tipo de recurso: | artículo |
| Fecha de publicación: | 2022 |
| País: | España |
| Institución: | Universidad de Navarra |
| Repositorio: | Dadun. Depósito Académico Digital de la Universidad de Navarra |
| Idioma: | inglés |
| OAI Identifier: | oai:dadun.unav.edu:10171/122440 |
| Acceso en línea: | https://hdl.handle.net/10171/122440 |
| Access Level: | acceso abierto |
| Palabra clave: | 5p-end FISH TERC TERT promoter methylation TERT promoter mutation Subtelomeric gene expression Telomere shortening |
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oai:dadun.unav.edu:10171/122440 |
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España |
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| dc.title.none.fl_str_mv |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| title |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| spellingShingle |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25 5p-end FISH TERC TERT promoter methylation TERT promoter mutation Subtelomeric gene expression Telomere shortening |
| title_short |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| title_full |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| title_fullStr |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| title_full_unstemmed |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| title_sort |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers |
| dc.creator.none.fl_str_mv |
Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25 Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448 Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1 Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5 Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283 Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25 Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359 Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83 Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9 Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47 Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2 Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7 García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7 Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95 Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36 Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61 Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27 Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145 Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73 Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76 Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740 Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19 Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11 |
| author |
Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25 |
| author_facet |
Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25 Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448 Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1 Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5 Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283 Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25 Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359 Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83 Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9 Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47 Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2 Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7 García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7 Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95 Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36 Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61 Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27 Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145 Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73 Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76 Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740 Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19 Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11 |
| author_role |
author |
| author2 |
Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448 Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1 Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5 Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283 Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25 Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359 Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83 Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9 Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47 Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2 Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7 García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7 Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95 Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36 Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61 Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27 Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145 Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73 Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76 Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740 Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19 Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11 |
| author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
| dc.contributor.none.fl_str_mv |
Dadun. Depósito Académico Digital Universidad de Navarra |
| dc.subject.none.fl_str_mv |
5p-end FISH TERC TERT promoter methylation TERT promoter mutation Subtelomeric gene expression Telomere shortening |
| topic |
5p-end FISH TERC TERT promoter methylation TERT promoter mutation Subtelomeric gene expression Telomere shortening |
| description |
Background: Comprehensive molecular studies on tumours are needed to delineate immortalization process steps and identify sensitive prognostic biomarkers in thyroid cancer. Methods and results: In this study, we extensively characterize telomere-related alterations in a series of 106 thyroid tumours with heterogeneous clinical outcomes. Using a custom-designed RNA-seq panel, we identified five telomerase holoenzyme-complex genes upregulated in clinically aggressive tumours compared to tumours from long-term disease-free patients, being TERT and TERC denoted as independent prognostic markers by multivariate regression model analysis. Characterization of alterations related to TERT re-expression revealed that promoter mutations, methylation and/or copy gains exclusively co-occurred in clinically aggressive tumours. Quantitative-FISH (fluorescence in situ hybridization) analysis of telomere lengths showed a significant shortening in these carcinomas, which matched with a high proliferative rate measured by Ki-67 immunohistochemistry. RNA-seq data analysis indicated that short-telomere tumours exhibit an increased transcriptional activity in the 5-Mb-subtelomeric regions, site of several telomerase-complex genes. Gene upregulation enrichment was significant for specific chromosome-ends such as the 5p, where TERT is located. Co-FISH analysis of 5p-end and TERT loci showed a more relaxed chromatin configuration in short telomere-length tumours compared to normal telomere-length tumours. Conclusions: Overall, our findings support that telomere shortening leads to a 5p subtelomeric region reorganization, facilitating the transcription and accumulation of alterations at TERT-locus. |
| publishDate |
2022 |
| dc.date.none.fl_str_mv |
2022 2022-01-01 2022 2022-01-01 |
| dc.type.none.fl_str_mv |
journal article http://purl.org/coar/resource_type/c_6501 |
| dc.type.openaire.fl_str_mv |
info:eu-repo/semantics/article |
| format |
article |
| dc.identifier.none.fl_str_mv |
https://hdl.handle.net/10171/122440 |
| url |
https://hdl.handle.net/10171/122440 |
| dc.language.none.fl_str_mv |
Inglés eng |
| language_invalid_str_mv |
Inglés |
| language |
eng |
| dc.rights.none.fl_str_mv |
open access http://purl.org/coar/access_right/c_abf2 |
| dc.rights.openaire.fl_str_mv |
info:eu-repo/semantics/openAccess |
| rights_invalid_str_mv |
open access http://purl.org/coar/access_right/c_abf2 |
| eu_rights_str_mv |
openAccess |
| dc.format.none.fl_str_mv |
application/pdf |
| dc.publisher.none.fl_str_mv |
John Wiley & Sons |
| publisher.none.fl_str_mv |
John Wiley & Sons |
| dc.source.none.fl_str_mv |
reponame:Dadun. Depósito Académico Digital de la Universidad de Navarra instname:Universidad de Navarra |
| instname_str |
Universidad de Navarra |
| reponame_str |
Dadun. Depósito Académico Digital de la Universidad de Navarra |
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Dadun. Depósito Académico Digital de la Universidad de Navarra |
| repository.name.fl_str_mv |
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| repository.mail.fl_str_mv |
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| _version_ |
1869406085524226048 |
| spelling |
Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markersMontero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855acMartínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2fGarcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bfMonteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fdGonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebdBlasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8cRodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74afRobledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac115p-end FISHTERCTERT promoter methylationTERT promoter mutationSubtelomeric gene expressionTelomere shorteningBackground: Comprehensive molecular studies on tumours are needed to delineate immortalization process steps and identify sensitive prognostic biomarkers in thyroid cancer. Methods and results: In this study, we extensively characterize telomere-related alterations in a series of 106 thyroid tumours with heterogeneous clinical outcomes. Using a custom-designed RNA-seq panel, we identified five telomerase holoenzyme-complex genes upregulated in clinically aggressive tumours compared to tumours from long-term disease-free patients, being TERT and TERC denoted as independent prognostic markers by multivariate regression model analysis. Characterization of alterations related to TERT re-expression revealed that promoter mutations, methylation and/or copy gains exclusively co-occurred in clinically aggressive tumours. Quantitative-FISH (fluorescence in situ hybridization) analysis of telomere lengths showed a significant shortening in these carcinomas, which matched with a high proliferative rate measured by Ki-67 immunohistochemistry. RNA-seq data analysis indicated that short-telomere tumours exhibit an increased transcriptional activity in the 5-Mb-subtelomeric regions, site of several telomerase-complex genes. Gene upregulation enrichment was significant for specific chromosome-ends such as the 5p, where TERT is located. Co-FISH analysis of 5p-end and TERT loci showed a more relaxed chromatin configuration in short telomere-length tumours compared to normal telomere-length tumours. Conclusions: Overall, our findings support that telomere shortening leads to a 5p subtelomeric region reorganization, facilitating the transcription and accumulation of alterations at TERT-locus.John Wiley & SonsDadun. Depósito Académico Digital Universidad de Navarra20222022-01-0120222022-01-01journal articlehttp://purl.org/coar/resource_type/c_6501info:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10171/122440reponame:Dadun. Depósito Académico Digital de la Universidad de Navarrainstname:Universidad de NavarraInglésengopen accesshttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessoai:dadun.unav.edu:10171/1224402026-06-21T12:47:57Z |
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15.812455 |