Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers

Background: Comprehensive molecular studies on tumours are needed to delineate immortalization process steps and identify sensitive prognostic biomarkers in thyroid cancer. Methods and results: In this study, we extensively characterize telomere-related alterations in a series of 106 thyroid tumours...

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Detalles Bibliográficos
Autores: Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25, Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448, Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1, Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5, Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283, Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25, Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac, Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359, Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83, Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f, Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9, Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47, Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2, Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7, García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf, Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7, Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95, Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36, Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61, Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27, Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145, Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd, Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73, Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76, Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740, Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd, Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19, Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c, Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af, Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11
Tipo de recurso: artículo
Fecha de publicación:2022
País:España
Institución:Universidad de Navarra
Repositorio:Dadun. Depósito Académico Digital de la Universidad de Navarra
Idioma:inglés
OAI Identifier:oai:dadun.unav.edu:10171/122440
Acceso en línea:https://hdl.handle.net/10171/122440
Access Level:acceso abierto
Palabra clave:5p-end FISH
TERC
TERT promoter methylation
TERT promoter mutation
Subtelomeric gene expression
Telomere shortening
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repository_id_str
dc.title.none.fl_str_mv Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
title Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
spellingShingle Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25
5p-end FISH
TERC
TERT promoter methylation
TERT promoter mutation
Subtelomeric gene expression
Telomere shortening
title_short Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
title_full Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
title_fullStr Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
title_full_unstemmed Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
title_sort Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markers
dc.creator.none.fl_str_mv Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25
Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448
Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1
Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5
Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283
Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25
Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac
Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359
Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83
Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f
Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9
Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47
Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2
Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7
García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf
Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7
Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95
Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36
Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61
Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27
Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145
Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd
Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73
Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76
Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740
Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd
Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19
Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c
Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af
Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11
author Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25
author_facet Montero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25
Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448
Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1
Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5
Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283
Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25
Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac
Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359
Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83
Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f
Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9
Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47
Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2
Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7
García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf
Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7
Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95
Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36
Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61
Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27
Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145
Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd
Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73
Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76
Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740
Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd
Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19
Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c
Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af
Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11
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author2 Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448
Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1
Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5
Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283
Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25
Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855ac
Martínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359
Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83
Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2f
Garcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9
Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47
Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2
Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7
García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bf
Monteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7
Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95
Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36
Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61
Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27
Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145
Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fd
Gonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73
Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76
Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740
Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebd
Blasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19
Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8c
Rodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74af
Robledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac11
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dc.contributor.none.fl_str_mv Dadun. Depósito Académico Digital Universidad de Navarra
dc.subject.none.fl_str_mv 5p-end FISH
TERC
TERT promoter methylation
TERT promoter mutation
Subtelomeric gene expression
Telomere shortening
topic 5p-end FISH
TERC
TERT promoter methylation
TERT promoter mutation
Subtelomeric gene expression
Telomere shortening
description Background: Comprehensive molecular studies on tumours are needed to delineate immortalization process steps and identify sensitive prognostic biomarkers in thyroid cancer. Methods and results: In this study, we extensively characterize telomere-related alterations in a series of 106 thyroid tumours with heterogeneous clinical outcomes. Using a custom-designed RNA-seq panel, we identified five telomerase holoenzyme-complex genes upregulated in clinically aggressive tumours compared to tumours from long-term disease-free patients, being TERT and TERC denoted as independent prognostic markers by multivariate regression model analysis. Characterization of alterations related to TERT re-expression revealed that promoter mutations, methylation and/or copy gains exclusively co-occurred in clinically aggressive tumours. Quantitative-FISH (fluorescence in situ hybridization) analysis of telomere lengths showed a significant shortening in these carcinomas, which matched with a high proliferative rate measured by Ki-67 immunohistochemistry. RNA-seq data analysis indicated that short-telomere tumours exhibit an increased transcriptional activity in the 5-Mb-subtelomeric regions, site of several telomerase-complex genes. Gene upregulation enrichment was significant for specific chromosome-ends such as the 5p, where TERT is located. Co-FISH analysis of 5p-end and TERT loci showed a more relaxed chromatin configuration in short telomere-length tumours compared to normal telomere-length tumours. Conclusions: Overall, our findings support that telomere shortening leads to a 5p subtelomeric region reorganization, facilitating the transcription and accumulation of alterations at TERT-locus.
publishDate 2022
dc.date.none.fl_str_mv 2022
2022-01-01
2022
2022-01-01
dc.type.none.fl_str_mv journal article
http://purl.org/coar/resource_type/c_6501
dc.type.openaire.fl_str_mv info:eu-repo/semantics/article
format article
dc.identifier.none.fl_str_mv https://hdl.handle.net/10171/122440
url https://hdl.handle.net/10171/122440
dc.language.none.fl_str_mv Inglés
eng
language_invalid_str_mv Inglés
language eng
dc.rights.none.fl_str_mv open access
http://purl.org/coar/access_right/c_abf2
dc.rights.openaire.fl_str_mv info:eu-repo/semantics/openAccess
rights_invalid_str_mv open access
http://purl.org/coar/access_right/c_abf2
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv John Wiley & Sons
publisher.none.fl_str_mv John Wiley & Sons
dc.source.none.fl_str_mv reponame:Dadun. Depósito Académico Digital de la Universidad de Navarra
instname:Universidad de Navarra
instname_str Universidad de Navarra
reponame_str Dadun. Depósito Académico Digital de la Universidad de Navarra
collection Dadun. Depósito Académico Digital de la Universidad de Navarra
repository.name.fl_str_mv
repository.mail.fl_str_mv
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spelling Comprehensive molecular analysis of immortalization hallmarks in thyroid cancer reveals new prognostic markersMontero-Conde, C. (Cristina)|||/items/6d47bc2d-9ef9-4bfd-b374-e423d15b1a25Leandro-García, L.J. (Luis J.)|||/items/2b44a058-b84c-4a11-ba79-586cd96d0448Martínez-Montes, A.M. (Ángel M.)|||/items/b516ac80-4289-4500-bf8d-6020481456a1Martínez, P. (Paula)|||/items/1d9dee42-36b1-44e9-bbe7-6998383a3bf5Moya-Faz, F.J. (Francisco José)|||/items/6102aa74-fb85-4e24-a56b-0d455483b283Leton, R. (Rocío)|||/items/292ea14e-4a9d-44f5-b173-d1a1285e3e25Gil, E. (Eduardo)|||/items/b4f29bae-0e0f-4bd2-a246-99578b4855acMartínez-Puente, N. (Natalia)|||/items/342fc39d-2ebf-41dd-beb9-a9bd4ebea359Guadalix, S. (Sonsoles)|||/items/59ca9666-3549-43be-b944-428d56084e83Currás, M. (María)|||/items/da704e52-e034-47bd-9844-b7ce28b1ef2fGarcia-Tobar, L. (Laura)|||/items/64b398ed-0d60-4773-9118-e862d5d28ff9Zafón, C. (Carles)|||/items/25a3e6e5-617d-4937-b3ce-7fed784dbb47Jordá, M. (Mireia)|||/items/3d80cad9-83d9-4ca7-bce9-327e348710c2Riesco-Eizaguirre, G. (Garcilaso)|||/items/5b966126-3180-4b86-8215-aa6793d1b0d7García-Montón-González P. (Patricia)|||/items/066b96d4-7696-4d42-8723-7c86875ee1bfMonteagudo, M. (María)|||/items/13516cb2-250f-4738-961c-d101f67477d7Torres-Pérez, R. (Rafael)|||/items/a5a8b84f-5a87-4563-8114-2d402eea8f95Mancikova, V. (Veronika)|||/items/286402de-9eee-4e42-b39a-4ff976fe6d36Ruiz-Llorente, S. (Sergio)|||/items/94866d6e-caf0-4040-b178-c6702425da61Martínez-Pérez, J.M. (José Manuel)|||/items/5227974d-c5c8-45d6-a1de-3985e5732b27Pita, G. (Guillermo)|||/items/511d3d5b-17c7-49eb-99a2-b5e30c36b145Galofre-Ferrater, J.C. (Juan Carlos)|||/items/e7463ff9-97f4-4119-a307-fd978c0017fdGonzalez-Neira, A. (Anna)|||/items/8595341c-963a-4cbe-bdec-8b5267ad1b73Cascon, A. (Alberto)|||/items/15e22b8d-8e23-4935-a21e-1796f757fa76Rodriguez-Antona, C. (Cristina)|||/items/7e878c35-4151-4360-800d-066cc7de6740Megías, D. (Diego)|||/items/d96eda06-62b0-485e-8275-245da5f19ebdBlasco, M.A. (Maria A.)|||/items/947c369b-148a-4b1e-b1d0-33d7ed216c19Caleiras, E. (Eduardo)|||/items/a50fa3bb-6348-4b3b-996d-a6bb73dcdd8cRodriguez-Perales, S. (Sandra)|||/items/00d786b0-c4eb-4585-8b7a-30c17f7a74afRobledo, M. (Mercedes)|||/items/3fa84b0c-f9be-49a8-9290-c1c74231ac115p-end FISHTERCTERT promoter methylationTERT promoter mutationSubtelomeric gene expressionTelomere shorteningBackground: Comprehensive molecular studies on tumours are needed to delineate immortalization process steps and identify sensitive prognostic biomarkers in thyroid cancer. Methods and results: In this study, we extensively characterize telomere-related alterations in a series of 106 thyroid tumours with heterogeneous clinical outcomes. Using a custom-designed RNA-seq panel, we identified five telomerase holoenzyme-complex genes upregulated in clinically aggressive tumours compared to tumours from long-term disease-free patients, being TERT and TERC denoted as independent prognostic markers by multivariate regression model analysis. Characterization of alterations related to TERT re-expression revealed that promoter mutations, methylation and/or copy gains exclusively co-occurred in clinically aggressive tumours. Quantitative-FISH (fluorescence in situ hybridization) analysis of telomere lengths showed a significant shortening in these carcinomas, which matched with a high proliferative rate measured by Ki-67 immunohistochemistry. RNA-seq data analysis indicated that short-telomere tumours exhibit an increased transcriptional activity in the 5-Mb-subtelomeric regions, site of several telomerase-complex genes. Gene upregulation enrichment was significant for specific chromosome-ends such as the 5p, where TERT is located. Co-FISH analysis of 5p-end and TERT loci showed a more relaxed chromatin configuration in short telomere-length tumours compared to normal telomere-length tumours. Conclusions: Overall, our findings support that telomere shortening leads to a 5p subtelomeric region reorganization, facilitating the transcription and accumulation of alterations at TERT-locus.John Wiley & SonsDadun. Depósito Académico Digital Universidad de Navarra20222022-01-0120222022-01-01journal articlehttp://purl.org/coar/resource_type/c_6501info:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/10171/122440reponame:Dadun. Depósito Académico Digital de la Universidad de Navarrainstname:Universidad de NavarraInglésengopen accesshttp://purl.org/coar/access_right/c_abf2info:eu-repo/semantics/openAccessoai:dadun.unav.edu:10171/1224402026-06-21T12:47:57Z
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