Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil

24 páginas, 1 tabla

Detalles Bibliográficos
Autores: Carro, Lorena, Golinska, Patrycja, Nouioui, Imen, Bull, Alan T., Igual, José Mariano, Andrews, Barbara A., Klenk, Hans Peter, Goodfellow, Michael
Tipo de recurso: artículo
Estado:Versión aceptada para publicación
Fecha de publicación:2019
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/212253
Acceso en línea:http://hdl.handle.net/10261/212253
Access Level:acceso abierto
Palabra clave:Micromonospora acroterricola
Polyphasic taxonomy
Phylogeny
Atacama Desert soil
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spelling Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soilCarro, LorenaGolinska, PatrycjaNouioui, ImenBull, Alan T.Igual, José MarianoAndrews, Barbara A.Klenk, Hans PeterGoodfellow, MichaelMicromonospora acroterricolaPolyphasic taxonomyPhylogenyAtacama Desert soil24 páginas, 1 tablaA Micromonospora strain, designated 5R2A7T, isolated from a high altitude Atacama Desert soil was examined by using a polyphasic approach. Strain 5R2A7T was found to have morphological, chemotaxonomic and cultural characteristics typical of members of the genus Micromonospora . The cell wall contains meso- and hydroxy-diaminopimelic acid, the major whole-cell sugars are glucose, ribose and xylose, the predominant menaquinones MK-10(H4), MK-10(H6), MK-10(H8) and MK-9(H6), the major polar lipids diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and an unknown glycolipid, and the predominant cellular fatty acids iso-C16 : 0, iso-C15 : 0 and 10-methyl C17 : 0. The digital genomic DNA G+C content is 72.3 mol%. Phylogenetic analysis of the 16S rRNA gene sequence indicated that strain 5R2A7T was closely related to Micromonospora coriariae DSM 44875T (99.8 %) and Micromonospora cremea CR30T (99.7 %), and was separated readily from the latter, its closest phylogenetic neighbour, based on gyrB and multilocus sequence data, by low average nucleotide identity (92.59 %) and in silico DNA–DNA relatedness (51.7 %) values calculated from draft genome assemblies and by a range of chemotaxonomic and phenotypic properties. Consequently, strain 5R2A7T is considered to represent a novel species of Micromonospora for which the name Micromonospora acroterricola sp. nov. is proposed. The type strain is 5R2A7T (=LMG 30755T=CECT 9656T).Peer reviewedMicrobiology SocietyIgual, José Mariano [0000-0002-5080-0378]Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]202020202019info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Postprintinfo:eu-repo/semantics/acceptedVersionhttp://hdl.handle.net/10261/212253reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Ingléshttp://dx.doi.org/10.1099/ijsem.0.003634Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/2122532026-05-22T06:33:51Z
dc.title.none.fl_str_mv Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
title Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
spellingShingle Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
Carro, Lorena
Micromonospora acroterricola
Polyphasic taxonomy
Phylogeny
Atacama Desert soil
title_short Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
title_full Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
title_fullStr Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
title_full_unstemmed Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
title_sort Micromonospora acroterricola sp. nov., a novel actinobacterium isolated from a high altitude Atacama Desert soil
dc.creator.none.fl_str_mv Carro, Lorena
Golinska, Patrycja
Nouioui, Imen
Bull, Alan T.
Igual, José Mariano
Andrews, Barbara A.
Klenk, Hans Peter
Goodfellow, Michael
author Carro, Lorena
author_facet Carro, Lorena
Golinska, Patrycja
Nouioui, Imen
Bull, Alan T.
Igual, José Mariano
Andrews, Barbara A.
Klenk, Hans Peter
Goodfellow, Michael
author_role author
author2 Golinska, Patrycja
Nouioui, Imen
Bull, Alan T.
Igual, José Mariano
Andrews, Barbara A.
Klenk, Hans Peter
Goodfellow, Michael
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Igual, José Mariano [0000-0002-5080-0378]
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Micromonospora acroterricola
Polyphasic taxonomy
Phylogeny
Atacama Desert soil
topic Micromonospora acroterricola
Polyphasic taxonomy
Phylogeny
Atacama Desert soil
description 24 páginas, 1 tabla
publishDate 2019
dc.date.none.fl_str_mv 2019
2020
2020
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Postprint
info:eu-repo/semantics/acceptedVersion
format article
status_str acceptedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/212253
url http://hdl.handle.net/10261/212253
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv http://dx.doi.org/10.1099/ijsem.0.003634
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Microbiology Society
publisher.none.fl_str_mv Microbiology Society
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
repository.name.fl_str_mv
repository.mail.fl_str_mv
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score 15,811543

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