Tuning structure and dynamics of blue copper azurin junctions via single amino-acid mutations

In the growing field of biomolecular electronics, blue-copper Azurin stands out as one of the most widely studied protein in single-molecule contacts. Interestingly, despite the paramount importance of the structure/dynamics of molecular contacts in their transport properties, these factors remain l...

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Detalhes bibliográficos
Autores: Ortega Cruz, María, Vilhena Albuquerque D'Orey, José Guilherme, Zotti, Linda Ángela, Diéz-Pérez, Ismael, Cuevas Rodríguez, Juan Carlos, Pérez Pérez, Rubén
Tipo de documento: artigo
Data de publicação:2019
País:España
Recursos:Universidad Autónoma de Madrid
Repositório:Biblos-e Archivo. Repositorio Institucional de la UAM
Idioma:inglês
OAI Identifier:oai:repositorio.uam.es:10486/714974
Acesso em linha:http://hdl.handle.net/10486/714974
https://dx.doi.org/10.3390/biom9100611
Access Level:Acceso aberto
Palavra-chave:Biomolecular electronics
azurin
single molecule
solid-state junction
molecular dynamics
protein adsorption
electronic transport
single-point-mutation
Física
Descrição
Resumo:In the growing field of biomolecular electronics, blue-copper Azurin stands out as one of the most widely studied protein in single-molecule contacts. Interestingly, despite the paramount importance of the structure/dynamics of molecular contacts in their transport properties, these factors remain largely unexplored from the theoretical point of view in the context of single Azurin junctions. Here we address this issue using all-atom Molecular Dynamics (MD) of Pseudomonas Aeruginosa Azurin adsorbed to a Au(111) substrate. In particular, we focus on the structure and dynamics of the free/adsorbed protein and how these properties are altered upon single-point mutations. The results revealed that wild-type Azurin adsorbs on Au(111) along two well defined configurations: one tethered via cysteine groups and the other via the hydrophobic pocket surrounding the Cu2+. Surprisingly, our simulations revealed that single amino-acid mutations gave rise to a quenching of protein vibrations ultimately resulting in its overall stiffening. Given the role of amino-acid vibrations and reorientation in the dehydration process at the protein-water-substrate interface, we suggest that this might have an effect on the adsorption process of the mutant, giving rise to new adsorption configurations