Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)

Iberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out t...

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Autores: Figueiredo-Cardoso, T., Luigi-Sierra, Maria Gracia, Castelló, Anna, Cabrera, Betlem, Noce, Antonia, Mármol-Sánchez, Emilio, García-González, Ricardo, Fernández-Arias, A., Alabart, José Luis, López-Olvera, Jorge R., Mentaberre, Gregorio, Granados-Torres, José Enrique, Cardells-Peris, Jesús, Molina, Antonio, Sánchez, Armand, Clop, Alex, Amills, Marcel
Tipo de documento: artigo
Estado:Versão publicada
Data de publicação:2021
País:España
Recursos:Consejo Superior de Investigaciones Científicas (CSIC)
Repositório:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/264879
Acesso em linha:http://hdl.handle.net/10261/264879
Access Level:Acceso aberto
Palavra-chave:Capra pyrenaica
Genetic diversity
High-density SNP arrays
Iberian ibex
Introgression
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network_name_str España
repository_id_str
dc.title.none.fl_str_mv Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
spellingShingle Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
Figueiredo-Cardoso, T.
Capra pyrenaica
Genetic diversity
High-density SNP arrays
Iberian ibex
Introgression
title_short Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_full Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_fullStr Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_full_unstemmed Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
title_sort Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)
dc.creator.none.fl_str_mv Figueiredo-Cardoso, T.
Luigi-Sierra, Maria Gracia
Castelló, Anna
Cabrera, Betlem
Noce, Antonia
Mármol-Sánchez, Emilio
García-González, Ricardo
Fernández-Arias, A.
Alabart, José Luis
López-Olvera, Jorge R.
Mentaberre, Gregorio
Granados-Torres, José Enrique
Cardells-Peris, Jesús
Molina, Antonio
Sánchez, Armand
Clop, Alex
Amills, Marcel
author Figueiredo-Cardoso, T.
author_facet Figueiredo-Cardoso, T.
Luigi-Sierra, Maria Gracia
Castelló, Anna
Cabrera, Betlem
Noce, Antonia
Mármol-Sánchez, Emilio
García-González, Ricardo
Fernández-Arias, A.
Alabart, José Luis
López-Olvera, Jorge R.
Mentaberre, Gregorio
Granados-Torres, José Enrique
Cardells-Peris, Jesús
Molina, Antonio
Sánchez, Armand
Clop, Alex
Amills, Marcel
author_role author
author2 Luigi-Sierra, Maria Gracia
Castelló, Anna
Cabrera, Betlem
Noce, Antonia
Mármol-Sánchez, Emilio
García-González, Ricardo
Fernández-Arias, A.
Alabart, José Luis
López-Olvera, Jorge R.
Mentaberre, Gregorio
Granados-Torres, José Enrique
Cardells-Peris, Jesús
Molina, Antonio
Sánchez, Armand
Clop, Alex
Amills, Marcel
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv European Commission
Ministerio de Ciencia e Innovación (España)
Agencia Estatal de Investigación (España)
Generalitat de Catalunya
Ministerio de Economía y Competitividad (España)
Ministerio de Educación y Cultura (España)
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil)
Ministério da Educação (Brasil)
Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]
dc.subject.none.fl_str_mv Capra pyrenaica
Genetic diversity
High-density SNP arrays
Iberian ibex
Introgression
topic Capra pyrenaica
Genetic diversity
High-density SNP arrays
Iberian ibex
Introgression
description Iberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out to restock Iberian wild goat populations (very often with hunting purposes), but they were not systematically planned or recorded. On the other hand, recent data suggest the occurrence of hybridization events between Iberian wild goats and domestic goats (Capra hircus). Augmentation translocations and interspecific hybridization might have contributed to increase the diversity of Iberian wild goats. With the aim of investigating this issue, we have genotyped 118 Iberian wild goats from Tortosa-Beceite, Sierra Nevada, Muela de Cortes, Gredos, Batuecas, and Ordesa and Monte Perdido by using the Goat SNP50 BeadChip (Illumina). The analysis of genotypic data indicated that Iberian wild goat populations are strongly differentiated and display low diversity. Only three Iberian wild goats out from 118 show genomic signatures of mixed ancestry, a result consistent with a scenario in which past augmentation translocations have had a limited impact on the diversity of Iberian wild goats. Besides, we have detected eight Iberian wild goats from Tortosa-Beceite with signs of domestic goat introgression. Although rare, hybridization with domestic goats could become a potential threat to the genetic integrity of Iberian wild goats; hence, measures should be taken to avoid the presence of uncontrolled herds of domestic or feral goats in mountainous areas inhabited by this iconic wild ungulate.
publishDate 2021
dc.date.none.fl_str_mv 2021
2022
2022
2022
dc.type.none.fl_str_mv info:eu-repo/semantics/article
http://purl.org/coar/resource_type/c_6501
Publisher's version
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/10261/264879
url http://hdl.handle.net/10261/264879
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
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info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-105805RB-I00
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http://dx.doi.org/10.1111/eva.13299
Sí
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv John Wiley & Sons
publisher.none.fl_str_mv John Wiley & Sons
dc.source.none.fl_str_mv reponame:DIGITAL.CSIC. Repositorio Institucional del CSIC
instname:Consejo Superior de Investigaciones Científicas (CSIC)
instname_str Consejo Superior de Investigaciones Científicas (CSIC)
reponame_str DIGITAL.CSIC. Repositorio Institucional del CSIC
collection DIGITAL.CSIC. Repositorio Institucional del CSIC
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spelling Assessing the levels of intraspecific admixture and interspecific hybridization in Iberian wild goats (Capra pyrenaica)Figueiredo-Cardoso, T.Luigi-Sierra, Maria GraciaCastelló, AnnaCabrera, BetlemNoce, AntoniaMármol-Sánchez, EmilioGarcía-González, RicardoFernández-Arias, A.Alabart, José LuisLópez-Olvera, Jorge R.Mentaberre, GregorioGranados-Torres, José EnriqueCardells-Peris, JesúsMolina, AntonioSánchez, ArmandClop, AlexAmills, MarcelCapra pyrenaicaGenetic diversityHigh-density SNP arraysIberian ibexIntrogressionIberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out to restock Iberian wild goat populations (very often with hunting purposes), but they were not systematically planned or recorded. On the other hand, recent data suggest the occurrence of hybridization events between Iberian wild goats and domestic goats (Capra hircus). Augmentation translocations and interspecific hybridization might have contributed to increase the diversity of Iberian wild goats. With the aim of investigating this issue, we have genotyped 118 Iberian wild goats from Tortosa-Beceite, Sierra Nevada, Muela de Cortes, Gredos, Batuecas, and Ordesa and Monte Perdido by using the Goat SNP50 BeadChip (Illumina). The analysis of genotypic data indicated that Iberian wild goat populations are strongly differentiated and display low diversity. Only three Iberian wild goats out from 118 show genomic signatures of mixed ancestry, a result consistent with a scenario in which past augmentation translocations have had a limited impact on the diversity of Iberian wild goats. Besides, we have detected eight Iberian wild goats from Tortosa-Beceite with signs of domestic goat introgression. Although rare, hybridization with domestic goats could become a potential threat to the genetic integrity of Iberian wild goats; hence, measures should be taken to avoid the presence of uncontrolled herds of domestic or feral goats in mountainous areas inhabited by this iconic wild ungulate.This research was funded by the European Regional Development Fund (FEDER)/Ministerio de Ciencia e Innovación—Agencia Estatal de Investigación/Project Reference grant: PID2019-105805RB-I00 and by the CERCA Programme/Generalitat de Catalunya. We acknowledge the support of the Spanish Ministry of Economy and Competitiveness for the Center of Excellence Severo Ochoa 2020–2023 (CEX2019-000902-S) grant awarded to the Centre for Research in Agricultural Genomics (CRAG). We also acknowledge José Folch, of the Centro de Investigación y Tecnología Agroalimentaria de Aragón for his help in the development of his research. MGLS was funded with a FPI Ph.D. grant from the Spanish Ministry of Education (BES-C-2017-079079). TFC was funded with a fellowship from the CAPES Foundation-Coordination of Improvement of Higher Education, Ministry of Education of the Federal Government of Brazil. EMS was funded with a FPU Ph.D. grant from the Spanish Ministry of Education (FPU15/01733). GM is a Serra Húnter fellow (professor) of the Generalitat de Catalunya. Thanks also to the CERCA Programme of the Generalitat de Catalunya for their support. Sample collection benefitted from the research grants CGL2012-40043-C02-01, CGL2012-40043-C02-02, and CGL2016-80543-P, also from the Spanish Ministry of Economy and Competitiveness.John Wiley & SonsEuropean CommissionMinisterio de Ciencia e Innovación (España)Agencia Estatal de Investigación (España)Generalitat de CatalunyaMinisterio de Economía y Competitividad (España)Ministerio de Educación y Cultura (España)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil)Ministério da Educação (Brasil)Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72]2022202220212022info:eu-repo/semantics/articlehttp://purl.org/coar/resource_type/c_6501Publisher's versioninfo:eu-repo/semantics/publishedVersionhttp://hdl.handle.net/10261/264879reponame:DIGITAL.CSIC. Repositorio Institucional del CSICinstname:Consejo Superior de Investigaciones Científicas (CSIC)Inglés#PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE##PLACEHOLDER_PARENT_METADATA_VALUE#info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2019-105805RB-I00info:eu-repo/grantAgreement/MEC//BES-C-2017-079079info:eu-repo/grantAgreement/MECD//FPU15%2F01733info:eu-repo/grantAgreement/MINECO//CGL2012-40043-C02-01info:eu-repo/grantAgreement/MINECO//CGL2012-40043-C02-02info:eu-repo/grantAgreement/MINECO//CGL2016-80543-Phttp://dx.doi.org/10.1111/eva.13299Síinfo:eu-repo/semantics/openAccessoai:digital.csic.es:10261/2648792026-05-22T06:33:51Z
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