Reproducible R code for a systematic review and meta-analysis of anthrax model performance and human behavioural risk factors in Africa [Dataset]
[EN]A self-contained R Markdown document that reproduces the quantitative synthesis of a systematic review of quantitative anthrax (Bacillus anthracis) research in Africa. It performs random-effects (DerSimonian-Laird) meta-analyses of ecological niche / species distribution model discrimination (AU...
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| Tipo de recurso: | conjunto de datos |
| Estado: | Versión publicada |
| Fecha de publicación: | 2026 |
| País: | España |
| Institución: | Universidad de Salamanca (USAL) |
| Repositorio: | GREDOS. Repositorio Institucional de la Universidad de Salamanca |
| OAI Identifier: | oai:dnet:gredos______::eaff88f22891b91ab1c83f7bb02eaeb0 |
| Acceso en línea: | http://hdl.handle.net/10366/171704 |
| Access Level: | acceso abierto |
| Palabra clave: | meta-analysis systematic review random-effects model DerSimonian-Laird AUC ecological niche model species distribution model odds ratio heterogeneity publication bias R reproducible research anthrax Bacillus anthracis Africa Meta-Analysis as Topic Anthrax 1209 Estadística 3202.05 Epidemiología carbunco metanálisis como asunto |
| Sumario: | [EN]A self-contained R Markdown document that reproduces the quantitative synthesis of a systematic review of quantitative anthrax (Bacillus anthracis) research in Africa. It performs random-effects (DerSimonian-Laird) meta-analyses of ecological niche / species distribution model discrimination (AUC, pooled on the logit scale and back-transformed) and of adjusted odds ratios for human behavioural risk factors (pooled on the log scale), with heterogeneity (Cochran's Q, I^2, tau^2, prediction intervals), pre-specified subgroup analyses, meta-regression, sensitivity analyses and publication-bias assessment (funnel plots, Egger's test, trim-and-fill), and generates all associated figures and tables. The 33 study-level records and the behavioural odds ratios are embedded in the document, so the analysis runs from the deposited files alone. Developed for, and illustrated with, a systematic review and meta-analysis of quantitative anthrax research in Africa, and reusable as a template for other meta-analyses of model performance and observational effect sizes. |
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