Detection of early seeding of Richter transformation in chronic lymphocytic leukemia

Richter transformation (RT) is a paradigmatic evolution of chronic lymphocytic leukemia (CLL) into a very aggressive large B cell lymphoma conferring a dismal prognosis. The mechanisms driving RT remain largely unknown. We characterized the whole genome, epigenome and transcriptome, combined with si...

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Autores: Nadeu Prat, Ferran, Royo, Romina, Massoni Badosa, Ramon, Playà Albinyana, Heribert, Garcia-Torre, Beatriz, Duran Ferrer, Martí, Dawson, Kevin J., Kulis, Marta, Díaz Navarro, Ander, Villamor i Casas, Neus, Melero, Juan L., Chapaprieta, Vicente, Dueso Barroso, Ana, Delgado, Julio, Moia, Riccardo, Ruiz Gil, Sara, Marchese, Domenica, Giró, Ariadna, Verdaguer Dot, Núria, Clot Razquin, Guillem, Rozman, María, Frigola, Gerard, Rivas Delgado, Alfredo, Baumann, Tycho, Alcoceba, Miguel, González,Marco, Climent, Fina, Abrisqueta Costa, Pau, Castellví, Josep, Bosch, Francesc, Aymerich Gregorio, Marta, Enjuanes, Anna, Ruiz Gaspà, Silvia, López Guillermo, Armando, Jares Gerboles, Pedro, Beà Bobet, Sílvia M., Capella Gutiérrez, Salvador Jesús, 1985-, Gelpí Buchaca, Josep Lluís, López Bigas, Núria, Torrents Arenales, David, Campbell, Peter J., Gut, Ivo G., Rossi, Davide, Gaidano, Gianluca, Puente, Xose S., Garcia Roves, Pablo M., Colomer Pujol, Dolors, Heyn, Holger, Maura, Francesco, Martín-Subero, José Ignacio, Campo Güerri, Elias
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2022
País:España
Institución:Universidad de Barcelona
Repositorio:Dipòsit Digital de la UB
OAI Identifier:oai:diposit.ub.edu:2445/214988
Acceso en línea:https://hdl.handle.net/2445/214988
Access Level:acceso abierto
Palabra clave:Leucèmia limfocítica crònica
Limfomes
Genètica
Patologia
Chronic lymphocytic leukemia
Lymphomas
Genetics
Pathology
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spelling Detection of early seeding of Richter transformation in chronic lymphocytic leukemiaNadeu Prat, FerranRoyo, RominaMassoni Badosa, RamonPlayà Albinyana, HeribertGarcia-Torre, BeatrizDuran Ferrer, MartíDawson, Kevin J.Kulis, MartaDíaz Navarro, AnderVillamor i Casas, NeusMelero, Juan L.Chapaprieta, VicenteDueso Barroso, AnaDelgado, JulioMoia, RiccardoRuiz Gil, SaraMarchese, DomenicaGiró, AriadnaVerdaguer Dot, NúriaClot Razquin, GuillemRozman, MaríaFrigola, GerardRivas Delgado, AlfredoBaumann, TychoAlcoceba, MiguelGonzález,MarcoCliment, FinaAbrisqueta Costa, PauCastellví, JosepBosch, FrancescAymerich Gregorio, MartaEnjuanes, AnnaRuiz Gaspà, SilviaLópez Guillermo, ArmandoJares Gerboles, PedroBeà Bobet, Sílvia M.Capella Gutiérrez, Salvador Jesús, 1985-Gelpí Buchaca, Josep LluísLópez Bigas, NúriaTorrents Arenales, DavidCampbell, Peter J.Gut, Ivo G.Rossi, DavideGaidano, GianlucaPuente, Xose S.Garcia Roves, Pablo M.Colomer Pujol, DolorsHeyn, HolgerMaura, FrancescoMartín-Subero, José IgnacioCampo Güerri, EliasLeucèmia limfocítica crònicaLimfomesGenèticaPatologiaChronic lymphocytic leukemiaLymphomasGeneticsPathologyRichter transformation (RT) is a paradigmatic evolution of chronic lymphocytic leukemia (CLL) into a very aggressive large B cell lymphoma conferring a dismal prognosis. The mechanisms driving RT remain largely unknown. We characterized the whole genome, epigenome and transcriptome, combined with single-cell DNA/RNA-sequencing analyses and functional experiments, of 19 cases of CLL developing RT. Studying 54 longitudinal samples covering up to 19 years of disease course, we uncovered minute subclones carrying genomic, immunogenetic and transcriptomic features of RT cells already at CLL diagnosis, which were dormant for up to 19 years before transformation. We also identified new driver alterations, discovered a new mutational signature (SBS-RT), recognized an oxidative phosphorylation (OXPHOS)high-B cell receptor (BCR)low-signaling transcriptional axis in RT and showed that OXPHOS inhibition reduces the proliferation of RT cells. These findings demonstrate the early seeding of subclones driving advanced stages of cancer evolution and uncover potential therapeutic targets for RT.Nature Publishing Group2022info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://hdl.handle.net/2445/214988Articles publicats en revistes (Fonaments Clínics)reponame:Dipòsit Digital de la UBinstname:Universidad de BarcelonaInglésReproducció del document publicat a: https://doi.org/10.1038/s41591-022-01927-8Nature Medicine, 2022, vol. 28, num.8, p. 1662-1671https://doi.org/10.1038/s41591-022-01927-8cc-by(c) Nadeu, Ferran et al., 2022http://creativecommons.org/licenses/by/4.0/info:eu-repo/semantics/openAccessoai:diposit.ub.edu:2445/2149882026-05-27T06:46:51Z
dc.title.none.fl_str_mv Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
title Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
spellingShingle Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
Nadeu Prat, Ferran
Leucèmia limfocítica crònica
Limfomes
Genètica
Patologia
Chronic lymphocytic leukemia
Lymphomas
Genetics
Pathology
title_short Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
title_full Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
title_fullStr Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
title_full_unstemmed Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
title_sort Detection of early seeding of Richter transformation in chronic lymphocytic leukemia
dc.creator.none.fl_str_mv Nadeu Prat, Ferran
Royo, Romina
Massoni Badosa, Ramon
Playà Albinyana, Heribert
Garcia-Torre, Beatriz
Duran Ferrer, Martí
Dawson, Kevin J.
Kulis, Marta
Díaz Navarro, Ander
Villamor i Casas, Neus
Melero, Juan L.
Chapaprieta, Vicente
Dueso Barroso, Ana
Delgado, Julio
Moia, Riccardo
Ruiz Gil, Sara
Marchese, Domenica
Giró, Ariadna
Verdaguer Dot, Núria
Clot Razquin, Guillem
Rozman, María
Frigola, Gerard
Rivas Delgado, Alfredo
Baumann, Tycho
Alcoceba, Miguel
González,Marco
Climent, Fina
Abrisqueta Costa, Pau
Castellví, Josep
Bosch, Francesc
Aymerich Gregorio, Marta
Enjuanes, Anna
Ruiz Gaspà, Silvia
López Guillermo, Armando
Jares Gerboles, Pedro
Beà Bobet, Sílvia M.
Capella Gutiérrez, Salvador Jesús, 1985-
Gelpí Buchaca, Josep Lluís
López Bigas, Núria
Torrents Arenales, David
Campbell, Peter J.
Gut, Ivo G.
Rossi, Davide
Gaidano, Gianluca
Puente, Xose S.
Garcia Roves, Pablo M.
Colomer Pujol, Dolors
Heyn, Holger
Maura, Francesco
Martín-Subero, José Ignacio
Campo Güerri, Elias
author Nadeu Prat, Ferran
author_facet Nadeu Prat, Ferran
Royo, Romina
Massoni Badosa, Ramon
Playà Albinyana, Heribert
Garcia-Torre, Beatriz
Duran Ferrer, Martí
Dawson, Kevin J.
Kulis, Marta
Díaz Navarro, Ander
Villamor i Casas, Neus
Melero, Juan L.
Chapaprieta, Vicente
Dueso Barroso, Ana
Delgado, Julio
Moia, Riccardo
Ruiz Gil, Sara
Marchese, Domenica
Giró, Ariadna
Verdaguer Dot, Núria
Clot Razquin, Guillem
Rozman, María
Frigola, Gerard
Rivas Delgado, Alfredo
Baumann, Tycho
Alcoceba, Miguel
González,Marco
Climent, Fina
Abrisqueta Costa, Pau
Castellví, Josep
Bosch, Francesc
Aymerich Gregorio, Marta
Enjuanes, Anna
Ruiz Gaspà, Silvia
López Guillermo, Armando
Jares Gerboles, Pedro
Beà Bobet, Sílvia M.
Capella Gutiérrez, Salvador Jesús, 1985-
Gelpí Buchaca, Josep Lluís
López Bigas, Núria
Torrents Arenales, David
Campbell, Peter J.
Gut, Ivo G.
Rossi, Davide
Gaidano, Gianluca
Puente, Xose S.
Garcia Roves, Pablo M.
Colomer Pujol, Dolors
Heyn, Holger
Maura, Francesco
Martín-Subero, José Ignacio
Campo Güerri, Elias
author_role author
author2 Royo, Romina
Massoni Badosa, Ramon
Playà Albinyana, Heribert
Garcia-Torre, Beatriz
Duran Ferrer, Martí
Dawson, Kevin J.
Kulis, Marta
Díaz Navarro, Ander
Villamor i Casas, Neus
Melero, Juan L.
Chapaprieta, Vicente
Dueso Barroso, Ana
Delgado, Julio
Moia, Riccardo
Ruiz Gil, Sara
Marchese, Domenica
Giró, Ariadna
Verdaguer Dot, Núria
Clot Razquin, Guillem
Rozman, María
Frigola, Gerard
Rivas Delgado, Alfredo
Baumann, Tycho
Alcoceba, Miguel
González,Marco
Climent, Fina
Abrisqueta Costa, Pau
Castellví, Josep
Bosch, Francesc
Aymerich Gregorio, Marta
Enjuanes, Anna
Ruiz Gaspà, Silvia
López Guillermo, Armando
Jares Gerboles, Pedro
Beà Bobet, Sílvia M.
Capella Gutiérrez, Salvador Jesús, 1985-
Gelpí Buchaca, Josep Lluís
López Bigas, Núria
Torrents Arenales, David
Campbell, Peter J.
Gut, Ivo G.
Rossi, Davide
Gaidano, Gianluca
Puente, Xose S.
Garcia Roves, Pablo M.
Colomer Pujol, Dolors
Heyn, Holger
Maura, Francesco
Martín-Subero, José Ignacio
Campo Güerri, Elias
author2_role author
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author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
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author
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author
author
dc.subject.none.fl_str_mv Leucèmia limfocítica crònica
Limfomes
Genètica
Patologia
Chronic lymphocytic leukemia
Lymphomas
Genetics
Pathology
topic Leucèmia limfocítica crònica
Limfomes
Genètica
Patologia
Chronic lymphocytic leukemia
Lymphomas
Genetics
Pathology
description Richter transformation (RT) is a paradigmatic evolution of chronic lymphocytic leukemia (CLL) into a very aggressive large B cell lymphoma conferring a dismal prognosis. The mechanisms driving RT remain largely unknown. We characterized the whole genome, epigenome and transcriptome, combined with single-cell DNA/RNA-sequencing analyses and functional experiments, of 19 cases of CLL developing RT. Studying 54 longitudinal samples covering up to 19 years of disease course, we uncovered minute subclones carrying genomic, immunogenetic and transcriptomic features of RT cells already at CLL diagnosis, which were dormant for up to 19 years before transformation. We also identified new driver alterations, discovered a new mutational signature (SBS-RT), recognized an oxidative phosphorylation (OXPHOS)high-B cell receptor (BCR)low-signaling transcriptional axis in RT and showed that OXPHOS inhibition reduces the proliferation of RT cells. These findings demonstrate the early seeding of subclones driving advanced stages of cancer evolution and uncover potential therapeutic targets for RT.
publishDate 2022
dc.date.none.fl_str_mv 2022
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv https://hdl.handle.net/2445/214988
url https://hdl.handle.net/2445/214988
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv Reproducció del document publicat a: https://doi.org/10.1038/s41591-022-01927-8
Nature Medicine, 2022, vol. 28, num.8, p. 1662-1671
https://doi.org/10.1038/s41591-022-01927-8
dc.rights.none.fl_str_mv cc-by(c) Nadeu, Ferran et al., 2022
http://creativecommons.org/licenses/by/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv cc-by(c) Nadeu, Ferran et al., 2022
http://creativecommons.org/licenses/by/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Nature Publishing Group
publisher.none.fl_str_mv Nature Publishing Group
dc.source.none.fl_str_mv Articles publicats en revistes (Fonaments Clínics)
reponame:Dipòsit Digital de la UB
instname:Universidad de Barcelona
instname_str Universidad de Barcelona
reponame_str Dipòsit Digital de la UB
collection Dipòsit Digital de la UB
repository.name.fl_str_mv
repository.mail.fl_str_mv
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