Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)

Premise of the study: Microsatellite markers were developed to assess polymorphism and level of genetic diversity in four Mexican populations of the neotropical vine Dalechampia scandens (Euphorbiaceae). • Methods and Results: Thirty-seven microsatellite markers representing bi-, tri-, tetra-, and p...

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Autores: Falahati-Anbaran, Mohsen, Stenøien, Hans K., Pélabon, Christophe, Bolstad, Geir H., Pérez Barrales, Rocio, Hansen, Thomas F.
Tipo de recurso: artículo
Estado:Versión publicada
Fecha de publicación:2013
País:España
Institución:Universidad de Sevilla (US)
Repositorio:idUS. Depósito de Investigación de la Universidad de Sevilla
OAI Identifier:oai:idus.us.es:11441/57486
Acceso en línea:http://hdl.handle.net/11441/57486
https://doi.org/10.3732/apps.1200492
Access Level:acceso abierto
Palabra clave:Dalechampia scandens
Euphorbiaceae
genetic diversity
microsatellite loci
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repository_id_str
spelling Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)Falahati-Anbaran, MohsenStenøien, Hans K.Pélabon, ChristopheBolstad, Geir H.Pérez Barrales, RocioHansen, Thomas F.Dalechampia scandensEuphorbiaceaegenetic diversitymicrosatellite lociPremise of the study: Microsatellite markers were developed to assess polymorphism and level of genetic diversity in four Mexican populations of the neotropical vine Dalechampia scandens (Euphorbiaceae). • Methods and Results: Thirty-seven microsatellite markers representing bi-, tri-, tetra-, and pentanucleotide microsatellite repeats were developed. In total, 166 alleles were identified across 54 individuals. The number of alleles varied from one to 11 with an average of 4.49 alleles per locus. All loci except one were highly polymorphic between populations, whereas considerably less variation was detected within populations for most loci. The average observed and expected heterozygosities across study populations ranged from 0 to 0.63 and 0 to 0.59, respectively, for individual loci, and a deviation from Hardy–Weinberg equilibrium was observed for most loci. • Conclusions: The developed markers may be useful for studying genetic structure, parentage analysis, mapping, phylogeography, and cross-amplification in other closely related species of DalechampiaBotanical Society of AmericaBiología Vegetal y Ecología2013info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfapplication/pdfhttp://hdl.handle.net/11441/57486https://doi.org/10.3732/apps.1200492reponame:idUS. Depósito de Investigación de la Universidad de Sevillainstname:Universidad de Sevilla (US)InglésApplications in Plant Sciences, 1 (6), 1-4.http://dx.doi.org/ 10.3732/apps.1200492info:eu-repo/semantics/openAccessoai:idus.us.es:11441/574862026-06-17T12:51:07Z
dc.title.none.fl_str_mv Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
title Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
spellingShingle Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
Falahati-Anbaran, Mohsen
Dalechampia scandens
Euphorbiaceae
genetic diversity
microsatellite loci
title_short Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
title_full Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
title_fullStr Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
title_full_unstemmed Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
title_sort Development of microsatellite markers for the neotropical vine Dalechampia scandens (Euphorbiaceae)
dc.creator.none.fl_str_mv Falahati-Anbaran, Mohsen
Stenøien, Hans K.
Pélabon, Christophe
Bolstad, Geir H.
Pérez Barrales, Rocio
Hansen, Thomas F.
author Falahati-Anbaran, Mohsen
author_facet Falahati-Anbaran, Mohsen
Stenøien, Hans K.
Pélabon, Christophe
Bolstad, Geir H.
Pérez Barrales, Rocio
Hansen, Thomas F.
author_role author
author2 Stenøien, Hans K.
Pélabon, Christophe
Bolstad, Geir H.
Pérez Barrales, Rocio
Hansen, Thomas F.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Biología Vegetal y Ecología
dc.subject.none.fl_str_mv Dalechampia scandens
Euphorbiaceae
genetic diversity
microsatellite loci
topic Dalechampia scandens
Euphorbiaceae
genetic diversity
microsatellite loci
description Premise of the study: Microsatellite markers were developed to assess polymorphism and level of genetic diversity in four Mexican populations of the neotropical vine Dalechampia scandens (Euphorbiaceae). • Methods and Results: Thirty-seven microsatellite markers representing bi-, tri-, tetra-, and pentanucleotide microsatellite repeats were developed. In total, 166 alleles were identified across 54 individuals. The number of alleles varied from one to 11 with an average of 4.49 alleles per locus. All loci except one were highly polymorphic between populations, whereas considerably less variation was detected within populations for most loci. The average observed and expected heterozygosities across study populations ranged from 0 to 0.63 and 0 to 0.59, respectively, for individual loci, and a deviation from Hardy–Weinberg equilibrium was observed for most loci. • Conclusions: The developed markers may be useful for studying genetic structure, parentage analysis, mapping, phylogeography, and cross-amplification in other closely related species of Dalechampia
publishDate 2013
dc.date.none.fl_str_mv 2013
dc.type.none.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.none.fl_str_mv http://hdl.handle.net/11441/57486
https://doi.org/10.3732/apps.1200492
url http://hdl.handle.net/11441/57486
https://doi.org/10.3732/apps.1200492
dc.language.none.fl_str_mv Inglés
language_invalid_str_mv Inglés
dc.relation.none.fl_str_mv Applications in Plant Sciences, 1 (6), 1-4.
http://dx.doi.org/ 10.3732/apps.1200492
dc.rights.none.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
application/pdf
dc.publisher.none.fl_str_mv Botanical Society of America
publisher.none.fl_str_mv Botanical Society of America
dc.source.none.fl_str_mv reponame:idUS. Depósito de Investigación de la Universidad de Sevilla
instname:Universidad de Sevilla (US)
instname_str Universidad de Sevilla (US)
reponame_str idUS. Depósito de Investigación de la Universidad de Sevilla
collection idUS. Depósito de Investigación de la Universidad de Sevilla
repository.name.fl_str_mv
repository.mail.fl_str_mv
_version_ 1869404461918584832
score 15.301629

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