Analysis of bacterial pangenomes reduces CRISPR dark matter and reveals strong association between membranome and CRISPR-Cas systems [Dataset]

In this project we have searched for genes associated with CRISPR-Cas systems from bacteria of the ESKAPE group using Random Forest and we have been able to reduce the percentage of CRISPR black matter, as well as to propose a triad 'Membrane Proteins - Phages - CRISPR' by which bacterial...

Descripción completa

Detalles Bibliográficos
Autores: Rubio, Alejandro, Garzón, Andrés, Moreno-Rodríguez, Antonio, Pérez-Pulido, Antonio J.
Tipo de recurso: conjunto de datos
Estado:Versión publicada
Fecha de publicación:2022
País:España
Institución:Consejo Superior de Investigaciones Científicas (CSIC)
Repositorio:DIGITAL.CSIC. Repositorio Institucional del CSIC
OAI Identifier:oai:digital.csic.es:10261/376100
Acceso en línea:http://hdl.handle.net/10261/376100
Access Level:acceso abierto
Descripción
Sumario:In this project we have searched for genes associated with CRISPR-Cas systems from bacteria of the ESKAPE group using Random Forest and we have been able to reduce the percentage of CRISPR black matter, as well as to propose a triad 'Membrane Proteins - Phages - CRISPR' by which bacterial genomes would acquire CRISPR-Cas systems when they have certain useful membrane proteins that can act as viral receptors